BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: /mnt/ydrive-
ccfa/ExperimentalData/Cloning/Sequencing/UofC.BLAST.ByCloneID/input/
allseq
6 sequences; 7,137 total letters
Query= IDP96162.102
Length=1905
Score E
Sequences producing significant alignments: (Bits) Value
5_10B_B2_IDP96162.102_T7term.seq 1784 0.0
2_06B_B2_IDP96162.102_T7S.seq 1714 0.0
1_11C_C3_IDP96876.102_T7term.seq 369 1e-104
4_07C_C3_IDP96876.102_T7S.seq 333 7e-94
3_06H_H2_IDP96887.102_T7S.seq 251 2e-69
6_10H_H2_IDP96887.102_T7term.seq 196 1e-52
Query_1 1 TCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAATTC 60
1 4 ... 6
0 546 ............................................................ 487
0 479 ...G...........T.T.C.C.C....... 509
Query_1 61 CCC-TCTAGAAATAATTTT-GTTTAACTTTAAGAAGGAGATATACATATG-CACCA-TCA 116
1 7 ...N...NA..........T..............................-.....-... 64
0 486 ...-...............-..............................-.....-... 431
0 510 ...-.A... 517
3 5 ..N-...-...........-.....-.....-..N...............G.....C... 59
2 10 ...-.......-.......-..............................-.....-... 64
Query_1 117 TCATCA-TCATTCTTCTGG-TGTAGATCTGTGGTCTCATCCGCAGTTCGAAAAGGGTACC 174
1 65 ......-............-........................................ 122
0 430 ......-............-........................................ 373
3 60 ......C............A....................................N... 119
2 65 ......-............-........................................ 122
Query_1 175 GAGAACCTGTACTTCCAATCCAATGCCATGAGTGAACCCCTGTTAATTGCCCGCACGCCG 234
1 123 ............................................................ 182
1 621 ............ 610
0 372 .............................. 343
3 120 .............................. 149
2 123 .............................. 152
Query_1 235 GACACAGAACTGTTTTTACTGCCGGGAATGGCTAACCGTCATGGGCTGATTACCGGCGCA 294
1 183 ............................................................ 242
Query_1 295 ACGGGGACGGGTAAAACCGTTACGCTGCAAAAACTGGCGGAGTCATTGTCGGAAATCGGC 354
1 243 ............................................................ 302
0 274 ........... 284
Query_1 355 GTGCCGGTGTTTATGGCTGATGTGAAAGGCGATCTGACCGGCGTCGCGCAGGCAGGAACG 414
1 303 ............................................................ 362
Query_1 415 GTGTCGGAAAAACTGCTCGCAAGGCTTAAAAATATCGGCGTCAATGACTGGCAACCGCAT 474
1 363 ............................................................ 422
Query_1 475 GCCAATCCGGTGGTGGTGTGGGATATCTTTGGCGAGAAAGGCCATCCGGTGCGGGCGACG 534
1 423 ............................................................ 482
Query_1 535 GTTTCGGATCTGGGGCCGCTGTTGCTGGCACGACTGTTGAATCTCAACGATGTGCAATCT 594
1 483 ............................................................ 542
Query_1 595 GGCGTGCTGAATATCATCTTCCGCATTGCTGACGATCAGGGGCTGTTACTGCTCGACTTT 654
1 543 ............................................................ 602
Query_1 655 AAAGATCTGCGGGCAATTACCCAGTACATCGGCGATAACGCCAAATCC--TTCCA-GAAT 711
4 1166 .....N..NN..ANTG........AGN..........A.CA.A...N.... 1116
1 603 ................................................--.....-.... 659
1 177 ............ 166
Query_1 712 CAGTACGGTAATATCAGTAGCGCATCGGTTGGTGCCATCC-AGCGCGGGCTGTTGTCGCT 770
4 1115 .N..N..NN.-....C.........NN-.....N......CNNNN............... 1058
1 660 ........................................-................... 718
Query_1 771 GGAACAGCAAGGCGCAGCACAC-TTCTTTGGTGAGCCGATGCTGGATATCAAAGACTGGA 829
4 1057 .N.-..................-.....-........-........NT....-....... 1003
1 719 ......................T...................N................. 778
Query_1 830 TGCGCACCGATGCCAACGGTAAAGGCGTT-ATCAATATCCTCAGCGCCGAGAAACTTTAT 888
4 1002 ...............-......GA.....N.............................. 944
1 779 ..............C....N.........-...-.......................... 836
2 516 ............ 527
Query_1 889 CAGATGCCGAAACTGTACGCCGCCAGCCTGCTGTGGATGCTTTCAGAGTTGTATGAACAA 948
4 943 .............N......N-.........N..........CN.........NN.-... 886
1 837 ................N..N..N...N................................. 896
Query_1 949 TTGCCGGAAGCGGGCGATCTGGAGAAACCAAAACTGGTGTTTTTCTTCGACGAGGCACAT 1008
4 885 ....GN........................................-............. 827
1 897 ..................N......................................... 956
0 233 ............ 222
3 259 ............ 270
2 834 ....TG.G.. 825
5 1054 ....TG.N.. 1063
Query_1 1009 CTGCTGTTTAACGATGCCCCGCAGGTAC-TGCTGGATAAGATTGAGCAGGTGATAAGGCT 1067
4 826 ..........-.................-............................... 769
1 957 ......-..N.....N...GT..-....N........-.......N..........T... 1013
2 824 ......... 816
5 1064 .........C.. 1075
Query_1 1068 TATT-CGCTCAAAAGGCGTGGGCGTCTGGTTCGTTTCGCAAAA-CCCGTCTGATATTCCG 1125
4 768 ....-......................................A................ 710
1 1014 ....C.N...... 1026
Query_1 1126 G-ATAATGTGCTCGGGCAGCTCGGTAATCGCGTTCAACATGCTTTGCGGGCTTTTACGCC 1184
4 709 .G.......................................................... 650
Query_1 1185 AAAAGATCAGAAAGCAGTGAAGGCAGCGGCGCAAACCATGCGGGCCAATCCGGCGTTTGA 1244
4 649 ............................................................ 590
Query_1 1245 TACCGAAAAGGCGATTCAGGAACTGGGCACCGGCGAGGCGTTGATCTCTTTTCTGGATGC 1304
4 589 .........................................................N.. 530
3 477 . 477
Query_1 1305 GAAAGGAAGCCCTTCTGTGGTGGAGCGTGCGATGGTGATCGCGCCTTGTTCGCGGATGGG 1364
4 529 ............................................................ 470
3 478 .......... 487
Query_1 1365 GCCGGTGACGGAAGATGAGCGTAATGGCTTGATTAATCACTCTCCGGTGTATGGCAAATA 1424
4 469 ............................................................ 410
Query_1 1425 TGAGGATGAGGTGGACCGGGAATCCGCCTATGAGATGTTGCAAAAAGGCTTTCAGGCCAG 1484
4 409 ............................................................ 350
Query_1 1485 TACCGAGCAGCAAAATAATCCTCCCGCGAAAGGGAAAGAGGTAGCGGTGGATGACGGCAT 1544
4 349 ............................................................ 290
Query_1 1545 TCTTGGTGGATTGAAGGATATTTTGTTCGGCACTACCGGACCACGCGGCGGGAAGAAAGA 1604
4 289 ............................................................ 230
Query_1 1605 TGGTGTGGTGCAAACAATGGCCAAAAGCGCCGCTCGCCAAGTGACGAATCAGATTGTACG 1664
4 229 ............................................................ 170
Query_1 1665 CGGGATGTTGGGGAGTTTGCTgggggggAGAAGAAGGTAACATTGGAAGTGGATAACGGA 1724
4 169 ............................................................ 110
0 125 ......................... 101
3 367 ......................... 391
5 124 ....................... 102
Query_1 1725 TCCGAATTCGAGCTCCGTCGACAAGCTTGCGGCCGCACTCGAGcaccaccaccaccacca 1784
4 109 ........................N..N................................ 50
0 100 ............................................................ 41
3 392 .........T.....................................N........N... 451
5 101 ...........................................---.............. 45
Query_1 1785 cTGAGATCCGGCTGCTAACAAA-GCCCG-AAAGGAAGCTGAGTTGGCTGCTGCCACCGCT 1842
4 49 ......................-N....A....... 15
0 40 N.................NN..TN....-.. 11
3 452 ......................-.N...-............................... 509
5 44 ......................-.....-...A..... 9
Query_1 1843 GAGCAAT-AACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCT 1901
3 510 .....N.A............N.............N......N.................. 569
Query_1 1902 GA 1903
3 570 .. 571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 13282080
Query= IDP96876.102
Length=627
Score E
Sequences producing significant alignments: (Bits) Value
1_11C_C3_IDP96876.102_T7term.seq 944 0.0
4_07C_C3_IDP96876.102_T7S.seq 908 0.0
3_06H_H2_IDP96887.102_T7S.seq 251 6e-70
2_06B_B2_IDP96162.102_T7S.seq 244 9e-68
5_10B_B2_IDP96162.102_T7term.seq 197 1e-53
6_10H_H2_IDP96887.102_T7term.seq 196 4e-53
Query_2 1 TCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAATTC 60
0 546 ............................................................ 487
0 479 ...G...........T.T.C.C.C....... 509
1 4 ... 6
Query_2 61 CCC-TCTAGAAATAATTTT-GTTTAACTTTAAGAAGGAGATATACATATG-CACCA-TCA 116
0 486 ...-...............-..............................-.....-... 431
0 510 ...-.A... 517
3 5 ..N-...-...........-.....-.....-..N...............G.....C... 59
2 10 ...-.......-.......-..............................-.....-... 64
1 7 ...N...NA..........T..............................-.....-... 64
Query_2 117 TCATCA-TCATTCTTCTGG-TGTAGATCTGTGGTCTCATCCGCAGTTCGAAAAGGGTACC 174
0 430 ......-............-........................................ 373
3 60 ......C............A....................................N... 119
2 65 ......-............-........................................ 122
1 65 ......-............-........................................ 122
Query_2 175 GAGAACCTGTACTTCCAATCCAATGCCATGGGCAGAATTCTTCTCGATTTATCAGACGAT 234
0 372 ............................................................ 313
3 120 ............................................................ 179
2 123 .............................. 152
1 123 .............................. 152
Query_2 235 GTCATTCAACGTCTCGATGACCTCAAAGTGCAGCGTAACATTCCGCGAGCGGAACTGTTA 294
0 312 ............................................................ 253
3 180 .................................................N.......... 239
1 271 ........... 261
Query_2 295 CGTGAAGCGGTTGAACAATATCTGGAGAAACAAGATCGAGCTAAAGATACCATCTCCAGT 354
0 252 ............................................................ 193
3 240 ...............................N............................ 299
4 869 ............ 858
Query_2 355 GCGCTGGGTCTGTGGCAAGACTGCGAAGAAGACGGCATGGAATATCAACGTCAGCTACGC 414
0 192 ............................................................ 133
3 300 ..............N..................N.......................... 359
Query_2 415 AAGGAGTGGTAACATTGGAAGTGGATAACGGATCCGAATTCGAGCTCCGTCGACAAGCTT 474
0 132 ............................................................ 73
3 360 .........................................T.................. 419
4 134 .................................................N..N 82
5 124 ................................................... 74
Query_2 475 GCGGCCGCACTCGAGcaccaccaccaccaccacTGAGATCCGGCTGCTAACAAA-GCCCG 533
0 72 ................................N.................NN..TN.... 13
3 420 ...................N........N.........................-.N... 478
4 81 ......................................................-N.... 23
4 530 .. 529
5 73 ...............---....................................-..... 18
Query_2 534 -AAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAAT-AACTAGCATAACCCCTTGGG 591
0 12 -.. 11
3 479 -....................................N.A............N....... 537
4 22 A....... 15
4 528 -......... 520
5 17 -...A..... 9
Query_2 592 GCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGA 625
3 538 ......N......N.................... 571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4302051
Query= IDP96887.102
Length=2019
Score E
Sequences producing significant alignments: (Bits) Value
3_06H_H2_IDP96887.102_T7S.seq 2021 0.0
6_10H_H2_IDP96887.102_T7term.seq 1965 0.0
1_11C_C3_IDP96876.102_T7term.seq 369 1e-104
4_07C_C3_IDP96876.102_T7S.seq 329 9e-93
2_06B_B2_IDP96162.102_T7S.seq 244 3e-67
5_10B_B2_IDP96162.102_T7term.seq 194 5e-52
Query_3 1 TCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAATTC 60
0 546 ............................................................ 487
0 479 ...G...........T.T.C.C.C....... 509
1 4 ... 6
Query_3 61 CCC-TCTAGAAATAATTTT-GTTTAACTTTAAGAAGGAGATATACATATG-CACCA-TCA 116
2 10 ...-.......-.......-..............................-.....-... 64
0 486 ...-...............-..............................-.....-... 431
0 510 ...-.A... 517
3 5 ..N-...-...........-.....-.....-..N...............G.....C... 59
1 7 ...N...NA..........T..............................-.....-... 64
Query_3 117 TCATCA-TCATTCTTCTGG-TGTAGATCTGTGGTCTCATCCGCAGTTCGAAAAGGGTACC 174
2 65 ......-............-........................................ 122
0 430 ......-............-........................................ 373
3 60 ......C............A....................................N... 119
1 65 ......-............-........................................ 122
Query_3 175 GAGAACCTGTACTTCCAATCCAATGCCATGCTTGCGCCGAGGTGCAGGAGAGTGACTATG 234
2 123 ............................................................ 182
0 372 .............................. 343
3 120 .............................. 149
1 123 .............................. 152
Query_3 235 TGTAACAAGACCCTTACCTTGAACAGAACAGCGCAGCAACCTGTGGAACTGCCGGCTGAT 294
2 183 ............................................................ 242
Query_3 295 TATGACCGCTTGCTACAAAGTATTACCGTGCTGGCACCAGTACAGAAGATCAGTCTGGAC 354
2 243 ............................................................ 302
Query_3 355 ATTGATGTGACGCATAAAGCAGCGCTACCAGCGGTTCTTGAGTCAGCTCTTCTACTAGTG 414
2 303 ............................................................ 362
Query_3 415 GCGCAACTCGAAATCGTGTCTCCTTCTGAGTTAGGAGGCTTTTTCGGACTCGCTGACCAT 474
2 363 ............................................................ 422
Query_3 475 GAGCGTCAGGTTCTGGTTGATGAAATGATCGACACTGGCCTCGTGCGATACAATGATGAA 534
2 423 ............................................................ 482
Query_3 535 GGCGATATCGCGACTACAGTCAAGCTGACAATGCAGCGCCGAGAAGGCGCATCGGATGAG 594
2 483 ............................................................ 542
1 818 ............ 829
Query_3 595 GGCATTGCAATTGAGGACGTGGAAAATCACCGTGACTTCACCTTCATCGACCTTTGCACT 654
2 543 ............................................................ 602
2 669 ....G.A........... 686
Query_3 655 GGGCACATTCAGCCTAAGTGTAATGCGGACCTGCAGAAAGGTTTGCCCGAGTTGCCACGT 714
2 603 ............................................................ 662
Query_3 715 AAGATCAATCGCAGTGACTTCACCGATTTGATCGCTAGCCAATTTCGTCGCTTTCAGATT 774
2 663 ............................................................ 722
2 567 ....A.C........... 584
5 1203 .........NN--.....-........N.NN--..N.N..N..-...... 1160
Query_3 775 TGCTTACCCGATACCAAGAGCAAGCGC-GCACTGCGTAGCTCGAAGGCCCGACTCTACCG 833
2 723 ...........................-................................ 781
5 1159 -...-.N....NN..C..N...-....C..N...............A..N-......N.. 1104
Query_3 834 AGTGAATCGGGCCTCTGTTGGTCAATCGGGGTTGAAACAGCAGATCTCACTCGATATCCA 893
2 782 ............................................................ 841
5 1103 .........N-.NN..N.-.............-............N..........N... 1047
4 818 ...........G.GC.... 836
Query_3 894 CGTCCATTCCGATCCTCTGAACGGGATACGTCTGGACTCACGGTTGATGGACTATAGCTT 953
2 842 ............................................................ 901
5 1046 ..............NNN........................................... 987
Query_3 954 AGAGCATACACGCTTGATGGAAAGCTCCGGTCTCAAAACAGAGGCTATTAACTGGCTGCA 1013
2 902 ............................................................ 961
5 986 ............................................................ 927
Query_3 1014 CGAGCGCAAGTTAGAGGCCGCTAGTTCCACACTAGAAGACTATTGTGATCTGGCAAAAGA 1073
2 962 ............................................................ 1021
5 926 ............................................................ 867
Query_3 1074 TATGGTGATCCGCCGATATATCGGACGTGATGGTAAGCTGGAACTAGGGCGTTTACTCCA 1133
2 1022 ............................................................ 1081
2 1045 ............ 1034
5 866 ............................................................ 807
Query_3 1134 TGATCGCCAGCGCAGAAAAACCAGCTATGGTAACAGCACGATGCAACGTATGATGATTGG 1193
2 1082 ............NN..............................-............... 1140
5 806 ............................................................ 747
Query_3 1194 GCCTGTCTATGCAGCCCCCAATCGTAACACTTTAATTAAGTGGGCTGAACGGTTGCCACG 1253
5 746 ............................................................ 687
Query_3 1254 TCAGCAGCAGGTACATCAAGGAATCTGGCTTGGTGCTACCAACGAGTTATTTGGCGCTAG 1313
5 686 ............................................................ 627
Query_3 1314 TTTAGGTCTCGGGTCGTTCATCAAACAAATGAACACCGAGCTCGCAAGTGGAGAGCGCAA 1373
5 626 ............................................................ 567
Query_3 1374 CAGTCGCCTCAATTTGGCATTTCAGTGCGATGAGGAATTTCGGGCACAGCGTTTAATCAC 1433
5 566 ............................................................ 507
Query_3 1434 CAATCAGTTTAATAGCCGTACCGACGGTAGCCTACGAATTTTCCCAAAAGGCCGTTCTGA 1493
5 506 ............................................................ 447
Query_3 1494 GTCGCACTTGGAAATATTGGTTTTCCCTGGCGAGTACGGTATGGCAGTGGTTCAGTACCA 1553
5 446 ............................................................ 387
Query_3 1554 TGCTGCTTTGGATCCGTCTCTTGGGTATGCTGGCCTTACATTGCCAATCGGCTACTTCAC 1613
5 386 ............................................................ 327
Query_3 1614 GACGGACCCTGAGCAGGTAGCTCAGTTGTGGATGCAGGTGCAGCAACGAATCCAGTCACC 1673
5 326 ............................................................ 267
Query_3 1674 GGTTCGGTCAGCCGACCAGCCCGAGGTAGCGACAGATGATCTTAATAAGCTACTGGGTTG 1733
5 266 ............................................................ 207
Query_3 1734 TGCTCCTGCAGAATTGGCACAAATGCTAGTCGACAATTCCGAGGAAAAACTGAAAAAACT 1793
5 206 ............................................................ 147
Query_3 1794 GGTGGAAAGATTCAATCAACACTAACATTGGAAGTGGATAACGGATCCGAATTCGAGCTC 1853
5 146 ............................................................ 87
0 123 ...................................... 86
3 369 ................................T..... 406
4 132 ...................................... 95
Query_3 1854 CGTCGACAAGCTTGCGGCCGCACTCGAGcaccaccaccaccaccacTGAGATCCGGCTGC 1913
5 86 ............................---............................. 30
0 85 .............................................N.............. 26
3 407 ................................N........N.................. 466
4 94 .........N..N............................................... 35
Query_3 1914 TAACAAA-GCCCG-AAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAAT-AACTAGC 1970
5 29 .......-.....-...A..... 9
0 25 ...NN..TN....-.. 11
3 467 .......-.N...-....................................N.A....... 524
4 34 .......-N....A....... 15
Query_3 1971 ATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGA 2017
3 525 .....N.............N......N.................... 571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14084070
Database: /mnt/ydrive-
ccfa/ExperimentalData/Cloning/Sequencing/UofC.BLAST.ByCloneID/input/
allseq
Posted date: Mar 20, 2018 7:40 PM
Number of letters in database: 7,137
Number of sequences in database: 6
Matrix: blastn matrix 2 -3
Gap Penalties: Existence: 5, Extension: 2