BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: /mnt/ydrive- ccfa/ExperimentalData/Cloning/Sequencing/UofC.BLAST.ByCloneID/input/ allseq 6 sequences; 7,137 total letters Query= IDP96162.102 Length=1905 Score E Sequences producing significant alignments: (Bits) Value 5_10B_B2_IDP96162.102_T7term.seq 1784 0.0 2_06B_B2_IDP96162.102_T7S.seq 1714 0.0 1_11C_C3_IDP96876.102_T7term.seq 369 1e-104 4_07C_C3_IDP96876.102_T7S.seq 333 7e-94 3_06H_H2_IDP96887.102_T7S.seq 251 2e-69 6_10H_H2_IDP96887.102_T7term.seq 196 1e-52 Query_1 1 TCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAATTC 60 1 4 ... 6 0 546 ............................................................ 487 0 479 ...G...........T.T.C.C.C....... 509 Query_1 61 CCC-TCTAGAAATAATTTT-GTTTAACTTTAAGAAGGAGATATACATATG-CACCA-TCA 116 1 7 ...N...NA..........T..............................-.....-... 64 0 486 ...-...............-..............................-.....-... 431 0 510 ...-.A... 517 3 5 ..N-...-...........-.....-.....-..N...............G.....C... 59 2 10 ...-.......-.......-..............................-.....-... 64 Query_1 117 TCATCA-TCATTCTTCTGG-TGTAGATCTGTGGTCTCATCCGCAGTTCGAAAAGGGTACC 174 1 65 ......-............-........................................ 122 0 430 ......-............-........................................ 373 3 60 ......C............A....................................N... 119 2 65 ......-............-........................................ 122 Query_1 175 GAGAACCTGTACTTCCAATCCAATGCCATGAGTGAACCCCTGTTAATTGCCCGCACGCCG 234 1 123 ............................................................ 182 1 621 ............ 610 0 372 .............................. 343 3 120 .............................. 149 2 123 .............................. 152 Query_1 235 GACACAGAACTGTTTTTACTGCCGGGAATGGCTAACCGTCATGGGCTGATTACCGGCGCA 294 1 183 ............................................................ 242 Query_1 295 ACGGGGACGGGTAAAACCGTTACGCTGCAAAAACTGGCGGAGTCATTGTCGGAAATCGGC 354 1 243 ............................................................ 302 0 274 ........... 284 Query_1 355 GTGCCGGTGTTTATGGCTGATGTGAAAGGCGATCTGACCGGCGTCGCGCAGGCAGGAACG 414 1 303 ............................................................ 362 Query_1 415 GTGTCGGAAAAACTGCTCGCAAGGCTTAAAAATATCGGCGTCAATGACTGGCAACCGCAT 474 1 363 ............................................................ 422 Query_1 475 GCCAATCCGGTGGTGGTGTGGGATATCTTTGGCGAGAAAGGCCATCCGGTGCGGGCGACG 534 1 423 ............................................................ 482 Query_1 535 GTTTCGGATCTGGGGCCGCTGTTGCTGGCACGACTGTTGAATCTCAACGATGTGCAATCT 594 1 483 ............................................................ 542 Query_1 595 GGCGTGCTGAATATCATCTTCCGCATTGCTGACGATCAGGGGCTGTTACTGCTCGACTTT 654 1 543 ............................................................ 602 Query_1 655 AAAGATCTGCGGGCAATTACCCAGTACATCGGCGATAACGCCAAATCC--TTCCA-GAAT 711 4 1166 .....N..NN..ANTG........AGN..........A.CA.A...N.... 1116 1 603 ................................................--.....-.... 659 1 177 ............ 166 Query_1 712 CAGTACGGTAATATCAGTAGCGCATCGGTTGGTGCCATCC-AGCGCGGGCTGTTGTCGCT 770 4 1115 .N..N..NN.-....C.........NN-.....N......CNNNN............... 1058 1 660 ........................................-................... 718 Query_1 771 GGAACAGCAAGGCGCAGCACAC-TTCTTTGGTGAGCCGATGCTGGATATCAAAGACTGGA 829 4 1057 .N.-..................-.....-........-........NT....-....... 1003 1 719 ......................T...................N................. 778 Query_1 830 TGCGCACCGATGCCAACGGTAAAGGCGTT-ATCAATATCCTCAGCGCCGAGAAACTTTAT 888 4 1002 ...............-......GA.....N.............................. 944 1 779 ..............C....N.........-...-.......................... 836 2 516 ............ 527 Query_1 889 CAGATGCCGAAACTGTACGCCGCCAGCCTGCTGTGGATGCTTTCAGAGTTGTATGAACAA 948 4 943 .............N......N-.........N..........CN.........NN.-... 886 1 837 ................N..N..N...N................................. 896 Query_1 949 TTGCCGGAAGCGGGCGATCTGGAGAAACCAAAACTGGTGTTTTTCTTCGACGAGGCACAT 1008 4 885 ....GN........................................-............. 827 1 897 ..................N......................................... 956 0 233 ............ 222 3 259 ............ 270 2 834 ....TG.G.. 825 5 1054 ....TG.N.. 1063 Query_1 1009 CTGCTGTTTAACGATGCCCCGCAGGTAC-TGCTGGATAAGATTGAGCAGGTGATAAGGCT 1067 4 826 ..........-.................-............................... 769 1 957 ......-..N.....N...GT..-....N........-.......N..........T... 1013 2 824 ......... 816 5 1064 .........C.. 1075 Query_1 1068 TATT-CGCTCAAAAGGCGTGGGCGTCTGGTTCGTTTCGCAAAA-CCCGTCTGATATTCCG 1125 4 768 ....-......................................A................ 710 1 1014 ....C.N...... 1026 Query_1 1126 G-ATAATGTGCTCGGGCAGCTCGGTAATCGCGTTCAACATGCTTTGCGGGCTTTTACGCC 1184 4 709 .G.......................................................... 650 Query_1 1185 AAAAGATCAGAAAGCAGTGAAGGCAGCGGCGCAAACCATGCGGGCCAATCCGGCGTTTGA 1244 4 649 ............................................................ 590 Query_1 1245 TACCGAAAAGGCGATTCAGGAACTGGGCACCGGCGAGGCGTTGATCTCTTTTCTGGATGC 1304 4 589 .........................................................N.. 530 3 477 . 477 Query_1 1305 GAAAGGAAGCCCTTCTGTGGTGGAGCGTGCGATGGTGATCGCGCCTTGTTCGCGGATGGG 1364 4 529 ............................................................ 470 3 478 .......... 487 Query_1 1365 GCCGGTGACGGAAGATGAGCGTAATGGCTTGATTAATCACTCTCCGGTGTATGGCAAATA 1424 4 469 ............................................................ 410 Query_1 1425 TGAGGATGAGGTGGACCGGGAATCCGCCTATGAGATGTTGCAAAAAGGCTTTCAGGCCAG 1484 4 409 ............................................................ 350 Query_1 1485 TACCGAGCAGCAAAATAATCCTCCCGCGAAAGGGAAAGAGGTAGCGGTGGATGACGGCAT 1544 4 349 ............................................................ 290 Query_1 1545 TCTTGGTGGATTGAAGGATATTTTGTTCGGCACTACCGGACCACGCGGCGGGAAGAAAGA 1604 4 289 ............................................................ 230 Query_1 1605 TGGTGTGGTGCAAACAATGGCCAAAAGCGCCGCTCGCCAAGTGACGAATCAGATTGTACG 1664 4 229 ............................................................ 170 Query_1 1665 CGGGATGTTGGGGAGTTTGCTgggggggAGAAGAAGGTAACATTGGAAGTGGATAACGGA 1724 4 169 ............................................................ 110 0 125 ......................... 101 3 367 ......................... 391 5 124 ....................... 102 Query_1 1725 TCCGAATTCGAGCTCCGTCGACAAGCTTGCGGCCGCACTCGAGcaccaccaccaccacca 1784 4 109 ........................N..N................................ 50 0 100 ............................................................ 41 3 392 .........T.....................................N........N... 451 5 101 ...........................................---.............. 45 Query_1 1785 cTGAGATCCGGCTGCTAACAAA-GCCCG-AAAGGAAGCTGAGTTGGCTGCTGCCACCGCT 1842 4 49 ......................-N....A....... 15 0 40 N.................NN..TN....-.. 11 3 452 ......................-.N...-............................... 509 5 44 ......................-.....-...A..... 9 Query_1 1843 GAGCAAT-AACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCT 1901 3 510 .....N.A............N.............N......N.................. 569 Query_1 1902 GA 1903 3 570 .. 571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13282080 Query= IDP96876.102 Length=627 Score E Sequences producing significant alignments: (Bits) Value 1_11C_C3_IDP96876.102_T7term.seq 944 0.0 4_07C_C3_IDP96876.102_T7S.seq 908 0.0 3_06H_H2_IDP96887.102_T7S.seq 251 6e-70 2_06B_B2_IDP96162.102_T7S.seq 244 9e-68 5_10B_B2_IDP96162.102_T7term.seq 197 1e-53 6_10H_H2_IDP96887.102_T7term.seq 196 4e-53 Query_2 1 TCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAATTC 60 0 546 ............................................................ 487 0 479 ...G...........T.T.C.C.C....... 509 1 4 ... 6 Query_2 61 CCC-TCTAGAAATAATTTT-GTTTAACTTTAAGAAGGAGATATACATATG-CACCA-TCA 116 0 486 ...-...............-..............................-.....-... 431 0 510 ...-.A... 517 3 5 ..N-...-...........-.....-.....-..N...............G.....C... 59 2 10 ...-.......-.......-..............................-.....-... 64 1 7 ...N...NA..........T..............................-.....-... 64 Query_2 117 TCATCA-TCATTCTTCTGG-TGTAGATCTGTGGTCTCATCCGCAGTTCGAAAAGGGTACC 174 0 430 ......-............-........................................ 373 3 60 ......C............A....................................N... 119 2 65 ......-............-........................................ 122 1 65 ......-............-........................................ 122 Query_2 175 GAGAACCTGTACTTCCAATCCAATGCCATGGGCAGAATTCTTCTCGATTTATCAGACGAT 234 0 372 ............................................................ 313 3 120 ............................................................ 179 2 123 .............................. 152 1 123 .............................. 152 Query_2 235 GTCATTCAACGTCTCGATGACCTCAAAGTGCAGCGTAACATTCCGCGAGCGGAACTGTTA 294 0 312 ............................................................ 253 3 180 .................................................N.......... 239 1 271 ........... 261 Query_2 295 CGTGAAGCGGTTGAACAATATCTGGAGAAACAAGATCGAGCTAAAGATACCATCTCCAGT 354 0 252 ............................................................ 193 3 240 ...............................N............................ 299 4 869 ............ 858 Query_2 355 GCGCTGGGTCTGTGGCAAGACTGCGAAGAAGACGGCATGGAATATCAACGTCAGCTACGC 414 0 192 ............................................................ 133 3 300 ..............N..................N.......................... 359 Query_2 415 AAGGAGTGGTAACATTGGAAGTGGATAACGGATCCGAATTCGAGCTCCGTCGACAAGCTT 474 0 132 ............................................................ 73 3 360 .........................................T.................. 419 4 134 .................................................N..N 82 5 124 ................................................... 74 Query_2 475 GCGGCCGCACTCGAGcaccaccaccaccaccacTGAGATCCGGCTGCTAACAAA-GCCCG 533 0 72 ................................N.................NN..TN.... 13 3 420 ...................N........N.........................-.N... 478 4 81 ......................................................-N.... 23 4 530 .. 529 5 73 ...............---....................................-..... 18 Query_2 534 -AAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAAT-AACTAGCATAACCCCTTGGG 591 0 12 -.. 11 3 479 -....................................N.A............N....... 537 4 22 A....... 15 4 528 -......... 520 5 17 -...A..... 9 Query_2 592 GCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGA 625 3 538 ......N......N.................... 571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4302051 Query= IDP96887.102 Length=2019 Score E Sequences producing significant alignments: (Bits) Value 3_06H_H2_IDP96887.102_T7S.seq 2021 0.0 6_10H_H2_IDP96887.102_T7term.seq 1965 0.0 1_11C_C3_IDP96876.102_T7term.seq 369 1e-104 4_07C_C3_IDP96876.102_T7S.seq 329 9e-93 2_06B_B2_IDP96162.102_T7S.seq 244 3e-67 5_10B_B2_IDP96162.102_T7term.seq 194 5e-52 Query_3 1 TCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAATTC 60 0 546 ............................................................ 487 0 479 ...G...........T.T.C.C.C....... 509 1 4 ... 6 Query_3 61 CCC-TCTAGAAATAATTTT-GTTTAACTTTAAGAAGGAGATATACATATG-CACCA-TCA 116 2 10 ...-.......-.......-..............................-.....-... 64 0 486 ...-...............-..............................-.....-... 431 0 510 ...-.A... 517 3 5 ..N-...-...........-.....-.....-..N...............G.....C... 59 1 7 ...N...NA..........T..............................-.....-... 64 Query_3 117 TCATCA-TCATTCTTCTGG-TGTAGATCTGTGGTCTCATCCGCAGTTCGAAAAGGGTACC 174 2 65 ......-............-........................................ 122 0 430 ......-............-........................................ 373 3 60 ......C............A....................................N... 119 1 65 ......-............-........................................ 122 Query_3 175 GAGAACCTGTACTTCCAATCCAATGCCATGCTTGCGCCGAGGTGCAGGAGAGTGACTATG 234 2 123 ............................................................ 182 0 372 .............................. 343 3 120 .............................. 149 1 123 .............................. 152 Query_3 235 TGTAACAAGACCCTTACCTTGAACAGAACAGCGCAGCAACCTGTGGAACTGCCGGCTGAT 294 2 183 ............................................................ 242 Query_3 295 TATGACCGCTTGCTACAAAGTATTACCGTGCTGGCACCAGTACAGAAGATCAGTCTGGAC 354 2 243 ............................................................ 302 Query_3 355 ATTGATGTGACGCATAAAGCAGCGCTACCAGCGGTTCTTGAGTCAGCTCTTCTACTAGTG 414 2 303 ............................................................ 362 Query_3 415 GCGCAACTCGAAATCGTGTCTCCTTCTGAGTTAGGAGGCTTTTTCGGACTCGCTGACCAT 474 2 363 ............................................................ 422 Query_3 475 GAGCGTCAGGTTCTGGTTGATGAAATGATCGACACTGGCCTCGTGCGATACAATGATGAA 534 2 423 ............................................................ 482 Query_3 535 GGCGATATCGCGACTACAGTCAAGCTGACAATGCAGCGCCGAGAAGGCGCATCGGATGAG 594 2 483 ............................................................ 542 1 818 ............ 829 Query_3 595 GGCATTGCAATTGAGGACGTGGAAAATCACCGTGACTTCACCTTCATCGACCTTTGCACT 654 2 543 ............................................................ 602 2 669 ....G.A........... 686 Query_3 655 GGGCACATTCAGCCTAAGTGTAATGCGGACCTGCAGAAAGGTTTGCCCGAGTTGCCACGT 714 2 603 ............................................................ 662 Query_3 715 AAGATCAATCGCAGTGACTTCACCGATTTGATCGCTAGCCAATTTCGTCGCTTTCAGATT 774 2 663 ............................................................ 722 2 567 ....A.C........... 584 5 1203 .........NN--.....-........N.NN--..N.N..N..-...... 1160 Query_3 775 TGCTTACCCGATACCAAGAGCAAGCGC-GCACTGCGTAGCTCGAAGGCCCGACTCTACCG 833 2 723 ...........................-................................ 781 5 1159 -...-.N....NN..C..N...-....C..N...............A..N-......N.. 1104 Query_3 834 AGTGAATCGGGCCTCTGTTGGTCAATCGGGGTTGAAACAGCAGATCTCACTCGATATCCA 893 2 782 ............................................................ 841 5 1103 .........N-.NN..N.-.............-............N..........N... 1047 4 818 ...........G.GC.... 836 Query_3 894 CGTCCATTCCGATCCTCTGAACGGGATACGTCTGGACTCACGGTTGATGGACTATAGCTT 953 2 842 ............................................................ 901 5 1046 ..............NNN........................................... 987 Query_3 954 AGAGCATACACGCTTGATGGAAAGCTCCGGTCTCAAAACAGAGGCTATTAACTGGCTGCA 1013 2 902 ............................................................ 961 5 986 ............................................................ 927 Query_3 1014 CGAGCGCAAGTTAGAGGCCGCTAGTTCCACACTAGAAGACTATTGTGATCTGGCAAAAGA 1073 2 962 ............................................................ 1021 5 926 ............................................................ 867 Query_3 1074 TATGGTGATCCGCCGATATATCGGACGTGATGGTAAGCTGGAACTAGGGCGTTTACTCCA 1133 2 1022 ............................................................ 1081 2 1045 ............ 1034 5 866 ............................................................ 807 Query_3 1134 TGATCGCCAGCGCAGAAAAACCAGCTATGGTAACAGCACGATGCAACGTATGATGATTGG 1193 2 1082 ............NN..............................-............... 1140 5 806 ............................................................ 747 Query_3 1194 GCCTGTCTATGCAGCCCCCAATCGTAACACTTTAATTAAGTGGGCTGAACGGTTGCCACG 1253 5 746 ............................................................ 687 Query_3 1254 TCAGCAGCAGGTACATCAAGGAATCTGGCTTGGTGCTACCAACGAGTTATTTGGCGCTAG 1313 5 686 ............................................................ 627 Query_3 1314 TTTAGGTCTCGGGTCGTTCATCAAACAAATGAACACCGAGCTCGCAAGTGGAGAGCGCAA 1373 5 626 ............................................................ 567 Query_3 1374 CAGTCGCCTCAATTTGGCATTTCAGTGCGATGAGGAATTTCGGGCACAGCGTTTAATCAC 1433 5 566 ............................................................ 507 Query_3 1434 CAATCAGTTTAATAGCCGTACCGACGGTAGCCTACGAATTTTCCCAAAAGGCCGTTCTGA 1493 5 506 ............................................................ 447 Query_3 1494 GTCGCACTTGGAAATATTGGTTTTCCCTGGCGAGTACGGTATGGCAGTGGTTCAGTACCA 1553 5 446 ............................................................ 387 Query_3 1554 TGCTGCTTTGGATCCGTCTCTTGGGTATGCTGGCCTTACATTGCCAATCGGCTACTTCAC 1613 5 386 ............................................................ 327 Query_3 1614 GACGGACCCTGAGCAGGTAGCTCAGTTGTGGATGCAGGTGCAGCAACGAATCCAGTCACC 1673 5 326 ............................................................ 267 Query_3 1674 GGTTCGGTCAGCCGACCAGCCCGAGGTAGCGACAGATGATCTTAATAAGCTACTGGGTTG 1733 5 266 ............................................................ 207 Query_3 1734 TGCTCCTGCAGAATTGGCACAAATGCTAGTCGACAATTCCGAGGAAAAACTGAAAAAACT 1793 5 206 ............................................................ 147 Query_3 1794 GGTGGAAAGATTCAATCAACACTAACATTGGAAGTGGATAACGGATCCGAATTCGAGCTC 1853 5 146 ............................................................ 87 0 123 ...................................... 86 3 369 ................................T..... 406 4 132 ...................................... 95 Query_3 1854 CGTCGACAAGCTTGCGGCCGCACTCGAGcaccaccaccaccaccacTGAGATCCGGCTGC 1913 5 86 ............................---............................. 30 0 85 .............................................N.............. 26 3 407 ................................N........N.................. 466 4 94 .........N..N............................................... 35 Query_3 1914 TAACAAA-GCCCG-AAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAAT-AACTAGC 1970 5 29 .......-.....-...A..... 9 0 25 ...NN..TN....-.. 11 3 467 .......-.N...-....................................N.A....... 524 4 34 .......-N....A....... 15 Query_3 1971 ATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGA 2017 3 525 .....N.............N......N.................... 571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14084070 Database: /mnt/ydrive- ccfa/ExperimentalData/Cloning/Sequencing/UofC.BLAST.ByCloneID/input/ allseq Posted date: Mar 20, 2018 7:40 PM Number of letters in database: 7,137 Number of sequences in database: 6 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2