Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	5280870	5282403	1534	28 [27]	[27] 28	pcaG–pcaH	pcaG,pcaH

AGGAGCTGACCCAGGCACTGAATGAGGTGCGGCCGTTCCGTCGCCTGGAAGGCATCGACCTGAAGAGTTATCAGTTCGGTACCGTGTTCGTCGACCCACCGCGTGCGGGGATGGACCCGGATACCTGCGAGCTGACCCGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTC  >  AE015451/5280569‑5281026                                                                                                                                                                                                                                                                                                             |                                                                                                                                                              aggagCTGACCCAGGCACTGAATGAGGTGCGGCCGTTCCGTCGCCTGGAAGGCATCGACCTGAAGAGTTATCAGTTCGGTACCGTGTTCGTCGACCCACCGCGTGCGGGGATGGACCCGGATACCTGCGAGCTGACCCGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGTTTCTGCTGGTTCGGCGCTTATc                                                                                                                                                               >  2:184057/1‑301 (MQ=255)    agCTGACCCAGGCACTGAATGAGGTGCGGCCGTTCCGTCGCCTGGAAGGCATCGACCTGAAGAGTTATCAGTTCGGTACCGTGTTCGTCGACCCACCGCGTGCGGGGATGGACCCGGATACCTGCGAGCTGACCCGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGtt                                                                                                                                                            <  4:527855/301‑1 (MQ=255)     gCTGACCCAGGCACTGAATGAGGTGCGGCCGTTCCGTCGCCTGGAAGGCATCGACCTGAAGAGTTATCAGTTCGGTACCGTGTTCGTCGACCCACCGCGTGCGGGGATGGACCCGGATACCTGCGAGCTGACCCGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGACGCTGATCGTTg                                                                                                                                                           <  3:159412/301‑1 (MQ=255)              ggCACTGAATGAGGTGCGGCCGTTCCGTCGCCTGGAAGGCATCGACCTGAAGAGTTATCAGTTCGGTACCGTGTTCGTCGACCCACCGCGTGCGGGGATGGACCCGGATACCTGCGAGCTGACCCGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCgg                                                                                                                                                  <  4:184091/301‑1 (MQ=255)                  cTGAATGAGGTGCGGCCGTTCCGTCGCCTGGAAGGCATCGACCTGAAGAGTTATCAGTTCGGTACCGTGTTCGTCGACCCACCGCGTGCGGGGATGGACCCGGATACCTGCGAGCTGACCCGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGgct                                                                                                                                              <  4:698453/301‑1 (MQ=255)                                 ccGTTCCGTCGCCTGGAAGGGATCGAGCTGAACGGTTATCAGGTCGGTACCGTGTTCGTCGACCCACCGCGTGCGGGGATGGACCCGGATACCTGCGAGCTGACCCGGCGTTTCGAGCGCAGTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACAGCCACCGCATCGGGCGCTGTGGATTGTTTGGCCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGGTCGTTGTATTGCCGGGGCTGCTTTGCAGCCCAtt                                                                                                                               <  1:410621/301‑1 (MQ=255)                                  cGTTCCGTCGCCTGGAAGGCATCGACCTGAAGAGTTATCAGTTCGGTACCGTGTTCGTCGACCCACCGCGTGCGGGGATGGACCCGGATACCTGCGAGCTGACCCGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTc                                                                                                                              >  4:111227/1‑301 (MQ=255)                                   gTTCCGTCGCCTGGAAGGCATCGACCTGAAGAGTTATCAGTTCGGTACCGTGTTCGTCGACCCACCGCGTGCGGGGATGGACCCGGATACCTGCGAGCTGACCCGGCGTTTCGCGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTACACCCACCATGTGGAGCGTGGGGTCGTGCTGGTTCGACGCTGACAGTTGTATCTCCGGGGGTGCttgccagccacttcc                                                                                                                             >  2:577279/1‑288 (MQ=255)                                   gTTCCGTCGCCTGGAAGGCATCGACCTGAAGAGTTATCAGTTCGGTACCGTGTTCGTCGACCCACCGCGTGCGGGGATGGACCCGGATACCTGCGAGCTGACCCGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATAGGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGCTCGTTGTATTGCCGGGGCGGCTTTGCAGCCCCTTcc                                                                                                                             >  2:475878/1‑300 (MQ=255)                                      ccGTCGCCTGGAAGGCATCGACCTGAAGAGTTATCAGTTCGGTACCGTGTTCGTCGACCCACCGCGTGCGGGGATGGACCCGGATACCTGCGAGCTGACCCGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCgg                                                                                                                          <  2:263204/301‑1 (MQ=255)                                        gTCGCCTGGAAGGCATCGACCTGAAGAGTTATCAGTTCGGTACCGTGTTCGTCGACCCACCGCGTGCGGGGATGGACCCGGATACCTGCGAGCTGACCCGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATCTGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTCGCGGCCCATTCGCGGGc                                                                                                                        >  2:644630/1‑301 (MQ=255)                                            ccTGGAAGGCATCGACCTGAAGAGTTATCAGTTCGGTACCGTGTTCGTCGACCCACCGCGTGCGGGGATGGACCCGGATACCTGCGAGCTGACCCGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCTATTCGCGGGCAAGc                                                                                                                    >  4:380666/1‑301 (MQ=255)                                              tGGAAGGCATCGACCTGAAGAGTTATCAGTTCGGTACCGTGTTCGTCGACCCACCGCGTGCGGGGATGGACCCGGATACCTGCGAGCTGACCCGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGccc                                                                                                                  <  4:638245/301‑1 (MQ=255)                                                              ggagagTTATCAGTTCGGTACCGTGTTCGTCGACCCACCGCGTGCGGGGATGGACCCGGATACCTGCGAGCTGACCCGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCg                                                                                                  <  4:644800/299‑1 (MQ=255)                                                                             cGGTACCGTGTTCGTCGACCCACCGCGTGCGGGGATGGACCCGGATACCTGCGAGCTGACCCGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCa                                                                                   <  4:41627/301‑1 (MQ=255)                                                                                 cccgggtTCGTCGACCCCCCGCGTGCGGGGATGGACCCGGATACCTGCGAGCTGACCCGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATc                                                                               <  2:275053/296‑1 (MQ=255)                                                                                    gtgtTCGTCGACCCACCGCGTGCGGGGATGGACCCGGATACCTGCGAGCTGACCCGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGtt                                                                            >  3:325425/1‑301 (MQ=255)                                                                                      gtTCGTCGACCCACCGCGTGCGGGGATGGACCCGGATACCTGCGAGCTGACCCGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGt                                                                          >  4:106248/1‑301 (MQ=255)                                                                                            cgACCCACCGCGTGCGGGGATGGACCCGGATACCTGCGAGCTGACCCGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGc                                                                    <  4:381485/301‑1 (MQ=255)                                                                                                                    cccGGATACCTGCGAGCTGACCCGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCa                                            >  4:149948/1‑301 (MQ=255)                                                                                                                       ggATACCTGCGAGCTGACCCGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTCGGAGCGGTCTTGCCCGCCAATGGGCCGCagac                                         >  2:134460/1‑300 (MQ=255)                                                                                                                       ggATACCTGCGAGCTGACCCGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCagag                                         <  1:325417/301‑1 (MQ=255)                                                                                                                          tACCTGCGAGCTGACCCGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCgg                                      <  4:475991/301‑1 (MQ=255)                                                                                                                                 ctacacgccgctcttccgatctgcATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAg                               <  2:730886/279‑1 (MQ=255)                                                                                                                                          cGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCAccgc                      >  4:146657/1‑299 (MQ=255)                                                                                                                                                       gcATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAgagatcggaagagcacacgtctg         >  4:731099/1‑279 (MQ=255)                                                                                                                                                         aTTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGTAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCCAGCTTCAccgcggccgctcaggaggt       >  4:268008/1‑284 (MQ=255)                                                                                                                                                              gTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCAccgcggccgctcaggaggttacga  >  3:170923/1‑279 (MQ=255)                                                                                                                                                                                                                                                                                                             |                                                                                                                                                              AGGAGCTGACCCAGGCACTGAATGAGGTGCGGCCGTTCCGTCGCCTGGAAGGCATCGACCTGAAGAGTTATCAGTTCGGTACCGTGTTCGTCGACCCACCGCGTGCGGGGATGGACCCGGATACCTGCGAGCTGACCCGGCGTTTCGAGCGCATTCTGTACATCTCGTGCAACCCGGAAACGCTGGCAGCGAACATTGCCCAGTTGCAGGACACCCACCGCATCGAGCGCTGTGCATTGTTTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTC  >  AE015451/5280569‑5281026

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑