Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	1551306	1552886	1581	17 [16]	[16] 17	pykA	pykA

GGTGCGGCGGATGCTCATGCACAGACTCCTATAGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGTCATGCTCGAACTGTCGCAGGTTGATCGCACCAGCCGTGCCCGGCCGTTCATCCACCCCGAAGTGTCA  >  AE015451/1552804‑1553187                                                                                    |                                                                                                                                                                                                                                                                                                             cacgacgctcttccgatctgtcaacagctcataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACcgcg                                                                                     <  1:614691/271‑1 (MQ=255)      gttcagacgtgtgctcttccgatcTATAGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGAt                                                                                <  4:15416/278‑1 (MQ=255)       ccgatgattaattgtcaacagctcataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGAtt                                                                               <  3:302816/277‑1 (MQ=255)             tgtgctcttccgatctacataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCAc                                                                         <  4:424064/283‑1 (MQ=255)              ctttccctccacgacgctcttccgatctcAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACg                                                                        <  2:460889/273‑1 (MQ=255)                    gtcaacagctcataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACcgcgagatcggaagagcacacgt                                                                  >  3:614693/12‑282 (MQ=255)                      caacagctcataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGTCATGc                                                                >  3:70792/10‑301 (MQ=255)                             acataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCAcagatcggaagagcgcg                                                         >  2:423955/3‑285 (MQ=255)                               ataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCgcggcgctagatcggaagagcgtcgtgtagggg                                                       >  2:15416/1‑274 (MQ=255)                                          cAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACgagatcggaagagcacacgtctgaactcc                                            >  4:461018/1‑273 (MQ=255)                                                 cccgttttccggcaTCTCTCTGTATTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGAGTGGCATTTGAACTGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAATAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGTCATGCTCGAACTGTCGCAGGTTGATCGCACCa                                     <  2:304349/288‑1 (MQ=255)                                                   gCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGTCATGCTCGAACTGTCGCAGGTTGATCGCACCAGc                                   >  3:513453/1‑301 (MQ=255)                                                     tACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGTCATGCTCGAACTGTCGCAGGTTGATCGCACCAGCCg                                 >  1:143476/1‑301 (MQ=255)                                                         ccTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAATAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGTCATGATCGAACTGTCGCAGGTTGATCGCACCacgatcgga                             >  4:304422/1‑293 (MQ=255)                                                         ccTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGTCATGCTCGAACTGTCGCAGGTTGATCGCACCAGCCGTGcc                             >  4:196721/1‑301 (MQ=255)                                                                         gTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGTCATGCTCGAACTGTCGCAGGTTGATCGCACCAGCCGTGCCCGGCCGTTCATCCAcc             >  4:519041/1‑301 (MQ=255)                                                                                    gTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGTCATGCTCGAACTGTCGCAGGTTGATCGCACCAGCCGTGCCCGGCCGTTCATCCACCCCGAAGTGTcc  >  4:701724/1‑300 (MQ=255)                                                                                    |                                                                                                                                                                                                                                                                                                             GGTGCGGCGGATGCTCATGCACAGACTCCTATAGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGTCATGCTCGAACTGTCGCAGGTTGATCGCACCAGCCGTGCCCGGCCGTTCATCCACCCCGAAGTGTCA  >  AE015451/1552804‑1553187

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑