Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	1644950	1647392	2443	17 [16]	[14] 17	[gcd]–[oprB‑II]	[gcd],[oprB‑II]

CTTCCTTGGTTCGCACCTTCAGTGCTCATCGTAGGTTCTCCGTCAGGTCAAAAAAGGGGTTAGAAACTGCTCTGGATCTTCAGGCCGCCGATCAGGGCGCCATCGACCTGCGACACCCCGCCCGGGTGGCGGATGTACTGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCGGCCTGGTTGACCAGGCGGGCGTTCTTGCGATAGGCAGGGTTGACGTGCACGCGGGCCAGGGCGAAACCGATGTCGTCCTTGGCGCGGGCATCGAAAGGCCCTTTGAAT  >  AE015451/1647328‑1647693                                                                  |                                                                                                                                                                                                                                                                                                             ccaaaacggatcccctgcaggacgcgtaTCGTAGGTTCTCCGTCAGGTCAAAAAAGGGGTTAGAAACTGCTCTGGATCTTCAGGCCGCCGATCAGGGCGCCATCGACCTGCGACACCCCGCCCGGGTGGCGGATGTACTGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCGGCCTGGTTGACCAGGCGGGCGTTCTTGCGATAGGCAGGGTTGa                                                                   <  1:469355/274‑1 (MQ=255)    taacggatcccctgcaggacgcgtaTCGTAGGTTCTCCGTCAGGTCAAAAAAGGGGTTAGAAACTGCTCTGGATCTTCAGGCCGCCGATCAGGGCGCCATCGACCTGCGACACCCCGCCCGGGTGGCGGATGTACTGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCGGCCTGGTTGACCAGGCGGGCGTTCTTGCGATAGGCAGGGTTGACGt                                                                >  3:53008/25‑301 (MQ=255)      gctcttccgatctaggacgcgtaTCGTAGGTTCTCCGTCAGGTCAAAAAAGGGGTTAGAAACTGCTCTGGATCTTCAGGCCGCCGATCAGGGCGCCATCGACCTGCGACACCCCGCCCGGGTGGCGGATGTACTGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCGGCCTGGTTGACCAGGCGGGCGTTCTTGCGATAGGCAGGGTTGACGTGc                                                              <  4:171126/279‑1 (MQ=255)          atcccctgcaggacgcgtaTCGTAGGTTCTCCGTCAGGTCAAAAAAGGGGTTAGAAACTGCTCTGGATCTTCAGGCCGCCGATCAGGGCGCCATCGACCTGCGACACCCCGCCCGGGTGGCGGATGTACTGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCGGCCTGGTTGACCAGGCGGGCGTTCTTGCGATAGGGAGGGTTGACGTGCAcgc                                                          >  2:250508/19‑301 (MQ=255)                  caggacgcgtaTCGTAGGTTCTCCGTCAGGTCAAAAAAGGGGTTAGAAACTGCTCTGGATCTTCAGGCCGCCGATCAGGGCGCCATCGACCTGCGACACCCCGCCCGGGTGGCGGATGTACTGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCGGCCTGGTTGACCAGGCGGGCGTTCTTGCGATAGGCTGGGTTGACGTGCACGCGGGCCAgg                                                  >  3:14800/11‑301 (MQ=255)                   aggacgcgtaTCGTAGGTTCTCCGTCAGGTCAAAAAAGGGGTTAGAAACTGCTCTGGATCTTCAGGCCGCCGATCAGGGCGCCATCGACCTGCGACACCCCGCCCGGGTGGCGGATGTACTGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCGGCCTGGTTGACCAGGCGGGCGTTCTTGCGATAGGCAGGGTTTACGTGCaggtcgggagggg                                                 >  2:171084/10‑289 (MQ=255)                                tAGGTTCTCCGTCAGGTCAAAAAAGGGGTTAGAAACTGCTCTGGATCTTCAGGCCGCCGATCAGGGCGCCATCGACCTGCGACACCCCGCCCGGGTGGCGGATGTACTGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCGGCCTGGTTGACCAGGCGGGCGTTCTTGCGATAGGCTGGGTTGACGTGCACGCGGGCCAGGGCGAAACCGATgtc                                    <  1:14800/301‑1 (MQ=255)                                 gggTTCTCCGTCAGGTCAAAAAAGGGGTTAGAAACTGCTCTGGATCTTCAGGCCGCCGATCAGGGCGCCATCGACCTGCGACACCCCGCCCGGGTGGCGGATGTACTGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCGGCCTGGTTGACCAGGCGGGCGTTCTTGCGATAGGCAGGGTTGACGTGCACGCGGGCCAGGGCGAAACCGATgtcg                                   <  1:306119/300‑1 (MQ=255)                                    ttCTCCGTCAGGTCAAAAAAGGGGTTAGAAACTGCTCTGGATCTTCAGGCCGCCGATCAGGGCGCCATCGACCTGCGACACCCCGCCCGGGTGGCGGATGTACTGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCGGCCTGGTTGACCAGGCGGGCGTTCTTGCGATAGGCAGGGTTGACGTGCACGCGGGCCAGGGCGAAACCGATGTCGTcc                                <  2:672611/301‑1 (MQ=255)                                           tCAGGTCAAAAAAGGGGTTAGAAACTGCTCTGGATCTTCAGGCCGCCGATCAGGGCGCCATCGACCTGCGACACCCCGCCCGGGTGGCGGATGTACTGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCGGCCTGGTTGACCAGGCGGGCGTTCTTGCGATAGGCAGGGTTGACGTGCACGCGGGCCAGGGCGACACCGATGTCGTCCTTGgcgg                         >  1:435935/1‑300 (MQ=255)                                                 cAAAAAAGGGGTTAGAAACTGCTCTGGATCTTCAGGCCGCCGATCAGGGCGCCATCGACCTGCGACACCCCGCCCGGGTGGCGGATGTACTGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCCGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCGGCCTGGTTGACCAGGCGGGCGTTCTTGCGATAGGCAGGGTTGACGTGCACGCGGGCCAGGGCGAAACCGATTTCGTCCTTGGCGCGGGCac                   >  2:621718/1‑300 (MQ=255)                                                  aaaaaaGGGGTTAGAAACTGCTCTGGATCTTCAGGCCGCCGATCAGGGCGCCATCGACCTGCGACACCCCGCCCGGGTGGCGGATGTACTGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCGGCCTGGTTGACCAGGCGGGCGTTCTTGCGATAGGCAGGGTTGACGTGCACGCGGGCCAGGGCGAAACCGATGTCGTCCTTGGCGCGGGcctc                  >  2:233255/1‑298 (MQ=255)                                                       aGGGGTTAGAAACTGCTCTGGATCTTCAGGCCGCCGATCAGGGCGCCATCGACCTGCGACACCCCGCCCGGGTGGCGGATGTACTGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCGGCCTGGTTGACCAGGCGGGCGTTCTTGCGATAGGCAGGGTTGACGTGCACGCGGGCCAGGGCGAAACCGATGTCGTCCTTGGCGCGGGCATCGAAAg             <  4:250566/301‑1 (MQ=255)                                                        ggggTTAGAAACTGCTCTGGATCTTCAGGCCGCCGATCAGGGCGCCATCGACCTGCGACACCCCGCCCGGGTGGCGGATGTACTGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCGGCCTGGTTGACCAGGCGGGCGTTCTTGCGATAGGCAGGGTTGACGTGCACGCGGGCCAGGGCGAAACCGATGTCGTCCTTGGCGCGGGCATCGAAAgg            <  1:53007/301‑1 (MQ=255)                                                           ccgatctaCTGCTCTGGATCTTCAGGCCGCCGATCAGGGCGCCATCGACCTGCGACACCCCGCCCGGGTGGCGGATGTACTGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCGGCCTGGTTGACCAGGCGGGCGTTCTTGCGATAGGCAGGGTTGACGTGCACGCGGGCCAGGGCGAAACCGATGTCGTCCTTGGCGCGGGCATCGAAAGGccc         <  1:377085/294‑1 (MQ=255)                                                                  aCTGCTCTGGATCTTCAGGCCGCCGATCAGGGCGCCATCGACCTGCGACACCCCGCCCGGGTGGCGGATGTACTGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCGGCCTGGTTGACCAGGCGGGCGTTCTTGCGATAGGCAGGGTTGACGTGCACGCGGGCCAGGGCGAAACCGATGTCGTCCTTGGCGCGGGCATCGAAAGGcccagatcgg  >  3:377085/1‑294 (MQ=255)                                                                  aCTGCTCTGGATCGTCAGGCCGCCGATCAGGGCGCCATCGACCTGCGACACCCCGCCCGGGTGGCGGATGTACTGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCGGCCTGGTTGACCAGGCGGGCGTTCTTGCGATAGGCAGGGTTGACGTGCACGCGGGCCAGGGCGAAACCGATGTCGTCCTTGGCGCGGGCATCGAAAGGCCCTTTGAAt  <  1:265017/301‑1 (MQ=255)                                                                  |                                                                                                                                                                                                                                                                                                             CTTCCTTGGTTCGCACCTTCAGTGCTCATCGTAGGTTCTCCGTCAGGTCAAAAAAGGGGTTAGAAACTGCTCTGGATCTTCAGGCCGCCGATCAGGGCGCCATCGACCTGCGACACCCCGCCCGGGTGGCGGATGTACTGCAGGTTGGGGCGTACCGTGAGCCAGTCGGCCAAGTGAATGCCGTAATACAGCTCGGCGCTGTACTCGGTGTCCTGCACTGGCAGGAAGCCCGGGTTGTCGTAGTCATAGAGGCCGGCGGCCTGGTTGACCAGGCGGGCGTTCTTGCGATAGGCAGGGTTGACGTGCACGCGGGCCAGGGCGAAACCGATGTCGTCCTTGGCGCGGGCATCGAAAGGCCCTTTGAAT  >  AE015451/1647328‑1647693

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑