Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	3276922	3278166	1245	17 [16]	[16] 17	ampC	ampC

GTGCAGCCAGACGTGGGCGGAGCATGGTGAGTCCTTTTGTGGAGCGTGTCCGTTGAGCGATACCACTCGGGGTTCCGGCGTTAGCGACGGGGAGCCAAAGACCTTATCGTCTGCCCACCCACCATGACAAGATGGATACAGTGATGAAGTATTTGCGCATGTTATTTGACAATTTCACCCTGGCCTTGCTCGGTGTGGTACTCATCGCCACCGTACTGCCTTGCTCGGGCGATGGCGCGGTGTATTTCGGCTGGCTGACCAACCTGGCCATTGGCCTGTTGTTCTTCCTGCATGGCGCCAAACTGTCCCGTGAAGCCATCATTGCCGGTGCCGGGCACTGGCGCCTGCACCTACTGGTGTTCTCCTGTACTT  >  AE015451/3278096‑3278467                                                                        |                                                                                                                                                                                                                                                                                                             catcagcacgcgtaccggttctagaggTGAGTCCTTTTGTGGAGCGTGTCCGTTGAGCGATACCACTCGGGGTTCCGGCGTTAGCGACGGGGAGCCAAAGACCTTATCGTCTGCCCACCCACCATGACAAGATGGATACAGTGATGAAGTATTTGCGCATGTTATTTGACAATTTCACCCTGGCCTTGCTCGGTGTGGTACTCATCGCCACCGTACTGCCTTGCTCGGGCGATGGCGCGGTGTATTTCGGCTGGCTGACCAACCTGGCCATTGGCCTGTTGTTCTTCCTGCATGGCGCCaa                                                                         >  3:215694/26‑301 (MQ=255)       cacgcgtaccggttctagaggTGAGTCCTTTTGTGGAGCGTGTCCGTTGAGCGATACCACTCGGGGTTCCGGCGTTAGCGACGGGGAGCCAAAGACCTTATCGTCTGCCCACCCACCATGACAAGATGGATACAGTGATGAAGTATTTGCGCATGTTATTTGACAATTTCACCCTGGCCTTGCTCGGTGTGGTACTCATCGCCACCGTACTGCCTTGCTCGGGCGATGGCGCGGTGTATTTCGGCTGGCTGACCAACCTGGCCATTGGCCTGTTGTTCTTCCTGCATGGCGCCAAACTGtt                                                                   >  1:466542/20‑300 (MQ=255)       cacgcgtaccggttctagaggTGAGTCCTTTTGTGGAGCGTGTCCGTTGAGCGATACCACTCGGGGTTCCGGCGTTAGCGACGGGGAGCCAAAGACCTTATCGTCTGCCCACCCACCATGACAAGATGGATACAGTGATGAAGTATTTGCGCATGTTATTTGACAATTTCACCCTGGCCTTGCTCGGTGTGGTACTCATCGCCACCGTACTGCCTTGCTCGGGCGATGGCGCGGTGTATTTCGGCTGGCTGACCAACCTGGCCATTGGCCTGTTGTTCTTCCTGCATGGCGCCAAACTGTc                                                                   <  3:466544/282‑1 (MQ=255)                       atctgTGAGTCCTTTTGTGGAGCGTGTCCGTTGAGCGATACCACTCGGGGTTCCGGCGTTAGCGACGGGGAGCCAAAGACCTTATCGTCTGCCCACCCACCATGACAAGATGGATACAGTGATGAAGTATTTGCGCATGTTATTTGACAATTTCACCCTGGCCTTGCTCGGTGTGGTACTCATCGCCACCGTACTGCCTTGCTCGGGCGATGGCGCGGTGTATTTCGGCTGGCTGACCAACCTGGCCATTGGCCTGTTGTTCTTCCTGCATGGCGCCAAACTGTCCCGTGAAGCCATCAtt                                                   <  3:383752/297‑1 (MQ=255)                        gaggTGAGTCCTTTTGTGGAGCGTGTCCGTTGAGCGATACCACTCGGGGTTCCGGCGTTAGCGACGGGGAGCCAAAGACCTTATCGTCTGCCCACCCACCATGACAAGATGGATACAGTGATGAAGTATTTGCGCATGTTATTTGACAATTTCACCCTGGCCTTGCTCGGTGTGGTACTCATCGCCACCGTACTGCCTTGCTCGGGCGATGGCGCGGTGTATTTCGGCTGGCTGACCAACCTGGCCATTGGCCTGTTGTTCTTCCTTCATGGCGCCAACCTGTCCCGTGAACCCATCAttt                                                  >  2:355181/3‑300 (MQ=255)                           gTGAGTCCTTTTGTGGAGCGTGTCCGTTGAGCGATACCACTCGGGGTTCCGGCGTTAGCGACGGGGAGCCAAAGACCTTATCGTCTGCCCACCCACCATGACAAGATGGATACAGTGATGAAGTATTTGCGCATGTTATTTGACAATTTCACCCTGGCCTTGCTCGGTGTGGTACTCATCGCCACCGTACTGCCTTGCTCGGGCGATGGCGCGGTGTATTTCGGCTGGCTGACCAACCTGGCCATTGGCCTGTTGTTCTTCCTGCATGGCGCCAAACTGTCCCGTGAAGCCATCAttagat                                               >  1:383752/1‑297 (MQ=255)                              ggTCCTTTTGTGGAGCGTGTCCGTTGAGCGATACCACTCGGGGTTCCGGCGTTAGCGACGGGGAGCCAAAGACCTTATCGTCTGCCCACCCACCATGACAAGATGGATACAGTGATGAAGTATTTGCGCATGTTATTTGACAATTTCACCCTGGCCTTGCTCGGTGTGGTACTCATCGCCACCGTACTGCCTTGCTCGGGCGATGGCGCGGTGTATTTCGGCTGGCTGACCAACCTGGCCATTGGCCTGTTGTTCTTCCTGCATGGCGCCAAACTGTCCCGTGAAGCCATCATtgccggtg                                            <  3:407473/300‑1 (MQ=255)                                       gtgGAGCGTGTCCGTTGAGCGATACCACTCGGGGTTCCGGCGTTAGCGACGGGGAGCCAAAGACCTTATCGTCTGCCCACCCACCATGACAAGATGGATACAGTGATGAAGTATTTGCGCATGTTATTTGACAATTTCACCCTGGCCTTGCTCGGTGTGGTACTCATCGCCACCGTACTGCCTTGCTCGGGCGATGGCGCGGTGTATTTCGGCTGGCTGACCAACCTGGCCATTGGCCTGTTGTTCTTCCTGCATTGCGCCAAACTGTCCGGTGAAGCCATCATtgccggttccggcccac                                   >  2:226076/1‑296 (MQ=255)                                         ggAGCGTGTCCGTTGAGCGATACCACTCGGGGTTCCGGCGTTAGCGACGGGGAGCCAAAGACCTTATCGTCTGCCCACCCACCATGACAAGATGGATACAGTGATGAAGTATTTGCGCATGTTATTTGACAATTTCACCCTGGCCTTGCTCGGTGTGGTACTCATCGCCACCGTACTGCCTTGCTCGGGCGATGGCGCGGTGTATTTCGGCTGGCTGACCAACCTGGCCATTGGCCTGTTGTTCTTCCTGCATGACGCCAAACTGTCCCGTGAAGCCATCATTGCCGGTGCCGGGCACTgg                                 >  4:98266/1‑301 (MQ=255)                                              gtgtCCGTTGAGCGATACCACTCGGGGTTCCGGCGTTAGCGACGGGGAGCCAAAGACCTTATCGTCTGCCCACCCACCATGACAAGATGGATACAGTGATGAAGTATTTGCGCATGTTATTTGACAATTTCACCCTGGCCTTGCTCGGTGTGGTACTCATCGCCACCGTACTGCCTTGCTCGGGCGATGGCGCGGTGTATTTCGGCTGGCTGACCAACCTGGCCATTGGCCTGTTGTTCTTCCTGCATGGCGCCAAATTGTCCCGTGAAGCCATCATTGCCGGTGCCGGGCACTGGCGccc                            >  3:139918/1‑300 (MQ=255)                                                  ccGTTGAGCGATACCACTCGGGGTTCCGGCGTTAGCGACGGGGAGCCAAAGACCTTATCGTCTGCCCACCCACCATGACAAGATGGATACAGTGATGAAGTATTTGCGCATGTTATTTGACAATTTCACCCTGGCCTTGCTCGGTGTGGTACTCATCGCCACCGTACTGCCTTGCTCGGGCGATGGCGCGGTGTATTTCGGCTGGCTGACCAACCTGGCCATTGGCCTGTTGTTCTTCCTGCATGGCGCCAAACTGTCCCGTGAAGCCATCATTGCCGTTGCCGGGCACTGGCGCCTGCAc                        >  2:609480/1‑301 (MQ=255)                                                   cGTTGAGCGATACCACTCGGGGTTCCGGCGTTAGCGACGGGGAGCCAAAGACCTTATCGTCTGCCCACCCACCATGACAAGATGGATACAGTGATGAAGTATTTGCGCATGTTATTTGACAATTTCACCCTGGCCTTGCTCGGTGTGGTACTCATCGCCACCGTACTGCCTTGCTCGGGCGATGGCGCGGTGTATTTCGGCTGGCTGACCAACCTGGCCATTGGCCTGTTGTTCTTCCTGCATGGCGCCAAACTGTCCCGTGAAGCCATCATTGCCGGTGCCGGGCACTGGCGCCTGCAcc                       >  1:306477/1‑301 (MQ=255)                                                      tGAGCGATACCACTCGGGGTTCCGGCGTTAGCGACGGGGAGCCAAAGACCTTATCGTCTGCCCACCCACCATGACAAGATGGATACAGTGATGAAGTATTTGCGCATGTTATTTGACAATTTCACCCTGGCCTTGCTCGGTGTGGTACTCATCGCCACCGTACTGCCTTGCTCGGGCGATGGCGCGGTGTATTTCGGCTGGCTGACCAACCTGGCCATTGGCCTGTTGTTCTTCCTGCATGGCGCCAAACTGTCCCGTGAAGCCATCATTGCCGGTGCCGGGCACTGGCGCCTGCACCTAc                    <  3:116018/301‑1 (MQ=255)                                                              aCCACTCGGGGTTCCGGCGTTAGCGACGGGGAGCCAAAGACCTTATCGTCTGCCCACCCACCATGACAAGATGGATACAGTGATGAAGTATTTGCGCATGTTATTTGACAATTTCACCCTGGCCTTGCTCGGTGTGGTACTCATCGCCACCGTACTGCCTTGCTCGGGCGATGGCGCGGTGTATTTCGGCTGGCTGACCAACCTGGCCATTGGCCTGTTGTTCTTCCTGCATGGCGCCAAACTGTCCCGTGAAGCCATCATTGCCGGTGCCGGGCACTGGCGCCTGCACCTACTGGTGttt            >  3:596685/1‑300 (MQ=255)                                                                  cTCGGGGTTCCGGCGTTAGCGACGGGGAGCCAAAGACCTTATCGTCTGCCCACCCACCATGACAAGATGGATACAGTGATGAAGTATTTGCGCATGTTATTTGACAATTTCACCCTGGCCTTGCTCGGTGTGGTACTCATCGCCACCGTACTGCCTTGCTCGGGCGATGGCGCGGTGTATTTCGGCTGGCTGACCAACCTGGCCATTGGCCTGTTGTTCTTCCTGCATGGCGCCAAACTGTCCCGTGAAGCCATCATTGCCGTTGCCCGGCACTGGGGCCTGCACCTTCTGGTGTTCTccc        >  2:449762/1‑300 (MQ=255)                                                                    gggggTTCCGGCGTTAGCGACGGGGAGCCAAAGACCTTATCGTCTGCCCACCCACCATGACAAGATGGATACAGTGATGAAGTATTTGCGCATGTTATTTGACAATTTCACCCTGGCCTTGCTCGGTGTGGTACTCATCGCCACCGTACTGCCTTGCTCGGGCGATGGCGCGGTGTATTTCGGCTGGCTGACCAACCTGGCCATTGGCCTGTTGTTCTTCCTGCATGGCGCCAAACTGTCCCGTGAAGCCATCATTGCCGGTGCCGGGCACTGGCGCCTGCACCTACTGGTGTTCTCCTGt      <  2:480317/300‑1 (MQ=255)                                                                        gTTCCGGCGTTAGCGACGGGGAGCCAAAGACCTTATCGTCTGCCCACCCACCATGACAAGATGGATACAGTGATGAAGTATTTGCGCATGTTATTTGACAATTTCACCCTGGCCTTGCTCGGTGTGGTACTCATCGCCACCGTACTGCCTTGCTCGGGCGATGGCGCGGTGTATTTCGGCTGGCTGACCAACCTGGCCATTGGCCTGTTGTTCTTCCTGCATGGCGCCAAACTGTCCCGTGAAGCCATCATTGCCGGTGCCGGGCACTGGCGCCTGCACCTACTGGTGTTCTCCTGTACtt  >  3:515369/1‑301 (MQ=255)                                                                        |                                                                                                                                                                                                                                                                                                             GTGCAGCCAGACGTGGGCGGAGCATGGTGAGTCCTTTTGTGGAGCGTGTCCGTTGAGCGATACCACTCGGGGTTCCGGCGTTAGCGACGGGGAGCCAAAGACCTTATCGTCTGCCCACCCACCATGACAAGATGGATACAGTGATGAAGTATTTGCGCATGTTATTTGACAATTTCACCCTGGCCTTGCTCGGTGTGGTACTCATCGCCACCGTACTGCCTTGCTCGGGCGATGGCGCGGTGTATTTCGGCTGGCTGACCAACCTGGCCATTGGCCTGTTGTTCTTCCTGCATGGCGCCAAACTGTCCCGTGAAGCCATCATTGCCGGTGCCGGGCACTGGCGCCTGCACCTACTGGTGTTCTCCTGTACTT  >  AE015451/3278096‑3278467

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑