Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AE015451 | 196,438 | 0 | T | C | 37.2% | 146.8 / 127.8 | 126 | S648S (AGT→AGC) | PP_0168 | putative surface adhesion protein |
Reads supporting (aligned to +/- strand): ref base T (35/41); new base C (23/22); total (62/64) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.07e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.98e-01 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 126 total aligned reads displayed.
CGAGAACGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCA > AE015451/196147‑196736 | cggtaaaggcACGGGCGCTAATTTCGGACAACGGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGCCTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTCAA‑‑GCCGGCACAACCCCGAGCAGCGTCGCTTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATc < 2:535410/292‑1 (MQ=14) gaACGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTC‑ACCATCgag > 3:623623/1‑301 (MQ=18) aaCGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAACCCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTAAGTGTC‑CCCATCgaga > 1:236038/1‑301 (MQ=255) ggagCGGTAATTTAGAGCAACTGACCCCGAGACAGAAGTCGGCTCAGACCACGAGCAACGACTCGGTCGAAACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCTTGCCCAGAAGGCGGCGACAGCCACCGAGACCAACACTCAAACCCTACCCGTCGAACTTCCG‑‑AACACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTC‑ACCATCGAGAACGCCAc < 1:118679/298‑1 (MQ=2) gggCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCAcc > 4:171951/1‑301 (MQ=255) gggCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCAcc < 2:171909/301‑1 (MQ=255) cGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTC‑ACCATCGAGAACGcaacaggc > 3:586867/1‑294 (MQ=12) aaTTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTa < 1:586865/301‑1 (MQ=16) tttCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAAt < 1:623621/301‑1 (MQ=12) tCGAGCCACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGTCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAGACCCAGCGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAAttt < 1:488184/301‑1 (MQ=255) aaCCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGGCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTg < 3:236036/300‑1 (MQ=255) cccGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAAAAACGGTTCGACGGTCAGTGTC‑ACAATCGAGAACGCCACCGGCGGTAATTTCCAG‑CAACTgccc > 2:450060/1‑298 (MQ=255) ccttccgatctaCCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGAc < 2:603337/290‑1 (MQ=255) cTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGc < 4:450189/301‑1 (MQ=255) aCCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGAcagatcggaaga > 4:603534/1‑290 (MQ=255) gTCGAAACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGTTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCgg < 4:582585/301‑1 (MQ=255) ctcccGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCCGCAAAACCCACGGCAGCGTCGATTCCCAGCCCCCACCGAATGACGTCCACAACAACGGCCCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGccac < 3:425637/298‑1 (MQ=14) gtgtgctcttccgatctgAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACCCCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGccacca < 4:639033/284‑1 (MQ=255) ggAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTAAGCCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTATC‑ACCATCGAGAACGCTATCGCCCGTAACGTCGCG‑CAACCGATCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGc < 1:523028/300‑1 (MQ=14) gAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCg > 4:657556/1‑301 (MQ=38) gAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATAAACGACTCGGTGGATGccaccaagaacggaagagcgtcg > 2:638822/1‑284 (MQ=255) gccccacGGTCAGCGAAGGCGGCGTGATCACTTACACCGTGACCCTGCGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAg < 2:657345/295‑1 (MQ=255) gTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCACAGACGCCGGTGACAGTGAACCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACACAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCAACCGGCGGCAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACACCGATACACGAACAGGTCGATGCAACCCCCGCCACCCTGCAGGCGAGcccc > 2:784894/1‑300 (MQ=14) cACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTc > 3:61259/1‑301 (MQ=38) aaGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGa > 4:468626/1‑301 (MQ=38) aGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGaa > 3:399539/1‑301 (MQ=38) gcgcgTGATCACTTACACCGGGACCCGGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAggc < 2:468497/299‑1 (MQ=255) cTTACACCGTGACCCGGAGCAAGCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCTTTGAA‑‑GCCGGCAAAACCCAGGGCAGCTTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCAc < 1:399539/301‑1 (MQ=255) cGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACAcc < 1:61257/301‑1 (MQ=38) gTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACAccc > 3:493788/1‑300 (MQ=38) tcttccgatctaTCCTGCCCAGACGCCGGTGAAAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTg < 3:436072/290‑1 (MQ=255) cAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGc > 1:534235/1‑301 (MQ=38) cAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGc < 4:516114/301‑1 (MQ=38) aTCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTTATCACCTACAcccgtagatcggaagg > 1:436070/1‑287 (MQ=255) cTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATcc > 3:26825/1‑301 (MQ=38) cccAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGc < 4:785174/301‑1 (MQ=38) aGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGATCCCGTCGGTCACCGAAGTCGGCGTGATCACCTACCCCGTGCCCCTGAGCAAACCTGcccc > 2:51377/1‑300 (MQ=255) aGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCa < 4:51394/301‑1 (MQ=38) aacgccgcgtaCAGTTACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAg < 1:179269/291‑1 (MQ=255) cGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGAc < 1:26825/301‑1 (MQ=38) cGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGAc < 1:493785/301‑1 (MQ=38) aCAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑a < 3:534237/301‑1 (MQ=39) tGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑cccc > 1:51143/1‑300 (MQ=255) ctttccctacacgacgctcttccgatctaaaaCCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAAc < 2:738247/273‑1 (MQ=255) ccAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACggg > 1:540955/1‑300 (MQ=255) aaaCCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCATCACGGACGACCGCCG‑GAAAGCCACAGACGGTAGATCCCAG‑TAGCTGCCGTAGCATCCAAAGACAGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACAGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCATGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGGCAAACGGcaa > 1:448716/1‑299 (MQ=2) cgaTTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAAc > 1:527430/3‑301 (MQ=2) tctgTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTa < 3:8893/298‑1 (MQ=255) ccGTTGAA‑‑TCCGGCAAAACCCAGGGCAGCGTCTACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTTGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTAc < 4:204376/301‑1 (MQ=11) ccGTGGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTAc < 3:540957/301‑1 (MQ=255) cGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTAcc > 4:526943/1‑301 (MQ=255) ttGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGt > 3:146335/1‑301 (MQ=255) ttcgaatgcggtaagacccaggtatgCGTCGATTTCCAGACCCCTGCGAATGAGGTCGACAACAACGGTGCGACAGTCAGCGTC‑ACTATCGATAACGTCACAGGCGGTAATGTCGAG‑CAACTGATCCCGAATCCGACCCCTGCTCAGACCACGATCAACGACGCGTTCGATGCCACAACCGCTACGCTGACGGCGAGCCCGTCGGTCACCGAAGGCGCCGTAATCATCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCg < 1:324234/276‑1 (MQ=11) aa‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTAGAACGGAC‑GCGCGCCAGAAAGCCACAGACGGTAGTTTCGGG‑CAACTGCCCCCGCATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACAGtttc > 1:500899/1‑299 (MQ=14) gCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAg < 3:527432/301‑1 (MQ=255) ggCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCTGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCg < 4:767167/301‑1 (MQ=255) ggCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGCCCTCGCACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCg < 4:177635/301‑1 (MQ=11) aaaaCCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAAcagatcggaagagcacacgtctgaactcc > 4:738507/1‑273 (MQ=255) aaCCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCAtagacaggaagagcgtcgtg > 2:95660/1‑282 (MQ=11) cccAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGATGAAGCCGGCAAGAc < 3:51144/301‑1 (MQ=255) ccctacacgacgctcttccgatctggCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAg < 2:633101/277‑1 (MQ=11) gCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACAGTCAGGGTC‑ACCATCGAGAACGCCACGGGCGGTAATTTCGAG‑CAACTGACCCCGATTCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCACTCCTGCCACGCCGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCACGACCCAggg > 1:38797/1‑301 (MQ=11) gTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTCCCGTTAAAGCCGGCAAAACCCAGGGCAgag > 2:168554/1‑299 (MQ=11) cGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTc > 4:251469/1‑301 (MQ=255) cttCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCAACGCGACCCTGACGGGGAGGAAGTCGGTCAACGAAGGTGGAGTAAGCACGCACACCGTGACCCTGAGCAATCATGCCCAGACGCCGGTG‑ACAGT‑GA‑CACTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGAAAGACAAAGGGCAGCGTCGAt > 4:297945/2‑301 (MQ=11) ttCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGAtt < 1:146333/301‑1 (MQ=255) cAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTcc > 3:376467/1‑301 (MQ=255) cagacgtgtgctcttccgatctcaacaaCGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCa < 3:357249/279‑1 (MQ=255) tgctcttccgatctaCGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAg < 4:118134/287‑1 (MQ=255) aCCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAgc > 4:541693/1‑300 (MQ=255) ggCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCAACGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCg < 4:163942/301‑1 (MQ=255) ggCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAgagatcggaagagcacacgtctgaa > 4:633304/1‑277 (MQ=11) gAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACCCCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTGCAAAGGCCAAACCATTACCGTTCAAGCGCGTAAGACCCAAGGCAACGtagacgtgcataccacggag > 2:405674/1‑282 (MQ=14) aaTGACGTCTACAACAACGGTTCGACTGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGa > 3:64404/1‑301 (MQ=255) aTGACGTCTACAACAACGGTTCGACTGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCATCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑GCCTGTCCAACGGCCAAACCATTACCGTTGACGCCGGCCAGCTCTACGGCATCGTCGATTTCCAGACCCCGGCGaa > 4:256061/1‑301 (MQ=11) aTGACGTCTACAACAACGGTTCGACTGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCaagatcggaagagcacacgtctgaactccag > 4:561578/1‑271 (MQ=11) tgacgcagacaacaACGGTTCGACTGTCAGCGTC‑AACAACGAGAACGCCACAGGCGGTACTTTCGAG‑CAACTGACCCCGAACTCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGCGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAAt < 2:256003/293‑1 (MQ=11) tGACGTCTACAACAACGGTTCGACTGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAAt < 3:384228/301‑1 (MQ=255) aCGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCCGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGACGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGAcatcggaagagcg > 2:118109/1‑289 (MQ=255) agTCTACAACAAAGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAAGCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCAACACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGAGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGAc < 4:164629/300‑1 (MQ=255) tgctcttccgatctgACTGTCAGCGTC‑ACCATCGAGAACGGCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCCACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCt < 4:4954/287‑1 (MQ=11) acaacaACGGTTCGACCGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCAAATgccgcctc > 2:287352/1‑294 (MQ=11) caacaaCGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCaagatcggaagagcgtcgtgtag > 1:357248/1‑279 (MQ=255) aacaacGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTaca > 1:200820/1‑301 (MQ=255) caacgttgcGACGGTCAGCGTC‑ACCATCGAGAACGCCACAGCCGGTAATTTCGAG‑CAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGCCCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTacaac < 1:64402/293‑1 (MQ=11) ggTTCGACCGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACg > 3:553687/1‑301 (MQ=255) ggTTCGACCGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACACCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACg > 3:241465/1‑301 (MQ=255) gTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACgg > 3:522481/1‑301 (MQ=255) gtCGACCGTCAGCGTC‑ACCAGCGAGAACGCCACAGGCGGTAA‑TTCCAGTCAACCGAACGCGAAGCCGACCCCGGCTCAGCCCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATGACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCACTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTGCCAGACCCCGGCGAATGACGTCTACAACAACGGt < 2:541536/300‑1 (MQ=11) gaccgTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCg < 4:287420/297‑1 (MQ=255) gACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCGCAGACCACGATCAACGACTCGGGCGATGCCACCACCGCTACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGAGTTCCAGACCCCGGCGACTTACGTCTACACCACCGGTTCg > 2:310492/1‑301 (MQ=14) gACTGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCCGCGTCGATTGCCAGCCCCGGGCGaagcgcgtctagaccgagcgaggc > 2:4954/1‑279 (MQ=11) ccgTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGATCCCGGCGAATGACGTCTACAACAACGGTTCGAc < 3:38798/299‑1 (MQ=255) cTGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGAcagatcggaagagcacacgtc > 4:437537/1‑281 (MQ=11) tGTCAGTGTC‑ACCATCGAGAACGCCCCCGGCGGTAATTTCGAG‑CAACTGACCCCGCATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCCACGGCCAAACCCTTCCCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGAcc < 3:500902/301‑1 (MQ=255) tGTCAGTGTC‑ACCAGCGACAACGCCACCGGCGGTAAGTTCGCG‑CAACTGACCCCGAATCCGACGCAGGCTCAGACAACGTTCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACTCCGTGACTTTATGC‑‑TACGGCGACCACCCAGATGTACACTCTATCCCGACCCGAC‑GCTATTCCGATCTCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGAcc < 2:526793/301‑1 (MQ=2) tGTCAGGGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGAACCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑GCCTGTCCAACGGCTAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGAcc < 3:448718/301‑1 (MQ=255) tGTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGAcc > 3:118397/1‑301 (MQ=12) gTCAGCGTC‑ACCATCGAGAACGCCACAGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTG‑ACCGT‑GA‑CCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGActg < 4:81001/301‑3 (MQ=11) aGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCa < 4:405783/301‑1 (MQ=40) | CGAGAACGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAA‑‑GCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTC‑ACCATCGAGAACGCCACCGGCGGTAATTTCGAG‑CAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTG‑ACAGT‑GA‑CCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCA > AE015451/196147‑196736 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |