Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	1551292	1552891	1600	27 [26]	[26] 27	pykA	pykA

GTGCGGCGGATGCTCATGCACAGACTCCTATAGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGTCATGCTCGAACTGTCGCAGGTTGATCGCACCAGCCGTGCCCGGCCGTTCATCCACCCCGAAGTGTCACTGCT  >  AE015451/1552805‑1553192                                                                                        |                                                                                                                                                                                                                                                                                                             acgagccgatgattaattgtcaacagctcataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCgcgg                                                                                         >  3:254454/30‑301 (MQ=255)  ctacacgacgctcttccgatctcagctcataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCgcggc                                                                                        <  1:567886/273‑1 (MQ=255)   gtgtgctcttccgatcttcaacagctcataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCgcggcg                                                                                       <  3:589262/274‑1 (MQ=255)      gctcttccgatctgtcaacagctcataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGAtt                                                                                    <  4:134321/277‑1 (MQ=255)       cgatgattaattgtcaacagctcataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTg                                                                                   >  4:589464/24‑301 (MQ=255)        gatgattaattgtcaacagctcataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTgc                                                                                  <  1:270710/279‑1 (MQ=255)          tgattaattgtcaacagctcataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTgcgc                                                                                >  1:380082/21‑301 (MQ=255)            tttaattgtcaacagcccataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCAc                                                                              <  2:589274/283‑1 (MQ=255)            cttccgatctaacagctcataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCAc                                                                              <  4:677994/283‑1 (MQ=255)            attaattgtcaacagctcataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCAc                                                                              >  4:646183/19‑301 (MQ=255)                atttgcaacagctcataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCATGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGACATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGt                                                                          <  1:528323/287‑1 (MQ=255)                   gtcaacagctcataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGagtagatcggaagagc                                                                       >  2:134285/12‑286 (MQ=255)                    tcaacagctcataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGagatcggaagagcgtcg                                                                      >  1:589251/11‑285 (MQ=255)                      aacagctcataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACAGGTcggaag                                                                    >  2:677759/9‑296 (MQ=255)                       acagctcataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGTCATGCTc                                                                   >  4:681546/8‑301 (MQ=255)                        cagctcataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCgcggcagatcggaagagcacacgtctg                                                                  >  3:567898/7‑279 (MQ=255)                              ataGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGTCATGCTCGAACTGt                                                            <  1:389704/301‑1 (MQ=255)                                   aagcggcAGCGAAAGGCTACTCCTGAATCTAGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGTCATGCTCGAACTGTCGCAg                                                       <  2:681311/296‑1 (MQ=255)                                           gCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGTCATGCTCGAACTGTCGCAGGTTGATCg                                               <  4:18958/301‑1 (MQ=255)                                             gAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGTCATGCTCGAACTGTCGCAGGTTGATCGcc                                             >  4:44862/1‑300 (MQ=255)                                               aaGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGTCATGCTCGAACTGTCGCAGGTTGATCGCAcc                                           >  1:144422/1‑301 (MQ=255)                                                 ggCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTCTAGCCTTGGTCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGTGCCTACGACCGCGGCGATTGCGCACGGGTCATGCTCGAACTGTCGCAGGTTGATCGCACCAg                                         >  1:411450/1‑301 (MQ=255)                                                            aaTCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGTCATGCTCGAACTGTCGCAGGTTGATCGCACCAGCCGTGCCCGGc                              >  3:248940/1‑301 (MQ=255)                                                                          cATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGTCATGCTCGAACTGTCGCAGGTTTGTCGCACCAGCCGTGCCCGGCCGTTCATCcccccc                >  2:152131/1‑301 (MQ=255)                                                                           aTTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGTCATGCTCGAACTGTCGCAGGTTGATCGCACCAGCCGTGCCCGGCCGTTCATCCACCCCg               <  3:380092/301‑1 (MQ=255)                                                                           aTTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGTCATGCTCGAACTGTCGCAGGTTGATCGCACCAGCCGTGCCCGGCCGTTCATCCACCCCg               >  4:99585/1‑301 (MQ=255)                                                                                        aCTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGTCATGCTCGAACTGTCGCAGGTTGATCGCACCAGCCGTGCCCGGCCGTTCATCCACCCCGAAGTGTCActgct  <  4:852556/301‑1 (MQ=255)                                                                                        |                                                                                                                                                                                                                                                                                                             GTGCGGCGGATGCTCATGCACAGACTCCTATAGTGAAGCGCAGCGAAAGGCTACTCCTGAATCTCGCTGTAGTCATTGTTCCGTTGCACTACCTGCAACCAAGGCAGGGTGGCATTTGAACGGGGCAGGGTATCCTTGCAAAAGGGTGTGAAGATTTGCAGGCAAACGCCGATACACTGGCATCAAAGGAGATCCCCATGCGAGCCCTGATCGTTTTAGCCTTGGCCGCCAGCGCCGTCGGCTGTACCCGCTGGTCCATGGACCACCATCTGAACAATGCCTACCGCGCCTACGACCGCGGCGATTGCGCACGGGTCATGCTCGAACTGTCGCAGGTTGATCGCACCAGCCGTGCCCGGCCGTTCATCCACCCCGAAGTGTCACTGCT  >  AE015451/1552805‑1553192

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑