Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	5280930	5282379	1450	27 [26]	[26] 27	pcaG–pcaH	pcaG,pcaH

CCTGGGCGGGCATGCCGGTTTCCTCTCTTGGAATTGTGAGAACGCCTGGGCGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCAAGGGGCTGGGGCTCGGGGCGATTCTGCTGATCGTCGGCATCGGCTGGCTCACC  >  AE015451/5282328‑5282680                                                     |                                                                                                                                                                                                                                                                                                             tttccctacacgacgctcttccgatctctGGAATTGTGAGAACGCCTGGGCGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCaa                                                      <  1:96570/273‑1 (MQ=255)   atgattaattgtcaacagctcagatctGGAATTGTGAGAACGCCTGGGCGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCAAgg                                                    <  1:543628/275‑1 (MQ=255)    ggattaattgtcaacagctcagactTGGAATTTTGAGAACGCCTGGGCGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCAAggg                                                   <  2:227597/278‑1 (MQ=255)     gattaattgtcaacagctcagatctGGAATTGTGAGAACGCCTGGGCGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCAAgggg                                                  >  4:282021/25‑301 (MQ=255)        taattgtcaacagctcagatctGGAATTGTGAGAACGCCTGGGCGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCAAggggctg                                               <  2:281945/280‑1 (MQ=255)         aattgtcaacagctcagatctGGAATTGTGAGAACGCCTGGGCGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCCGCGGCGGCAAggggcggg                                              >  2:487883/21‑298 (MQ=255)           ttgtcaacagctcagatctGGAATTGTGAGAACGCCTGGGCGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCAAggggctgggg                                            >  4:848267/19‑301 (MQ=255)             gtcaacagctcagatctGGAATTGTGAGAACGCCTGGGCGTGGCAAGCGGCCTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTTGCGGTGGCGGCATGCGCTTCGGCGGCGGCAAggggctggggct                                          <  2:610626/285‑1 (MQ=255)             acacgacgctcttccgatctaTTGTGAGAACGCCTGGGCGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCCGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCAAggggctggggct                                          <  1:673710/281‑1 (MQ=255)               caacagctcagatctGGAATTGTGAGAACGCCTGGGCGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCAAGGGGCTGGGGCTCg                                        <  4:67046/287‑1 (MQ=255)                ataagctgagatctGGAATTGTGAGAACGCCTGGGCGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGAGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCAAGGGGCTGGGGCTCgg                                       <  2:672413/288‑1 (MQ=255)                 acagctagaatttGGAATTGTGGGAAGGCCTGGGAGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTCGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCAAGGGGCTGGGGCTCggg                                      <  2:860589/290‑1 (MQ=255)                          atctGGAATTGTGAGAACGCCTGGGCGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCAAGGGGCTGGGGCTCGGGGCGATTctg                             <  1:555016/298‑1 (MQ=255)                           tctGGAATTGTGAGAACGCCTGGGCGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCCTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATTCGCTTCGGCCGCGGCAAGGGGCTGGGGTCCGGGGCggattcgg                            >  2:454318/3‑294 (MQ=255)                           cttccgatcttgAGAACGCCTGGGCGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCAAGGGGCTGGGGCTCGGGGCGATTctgc                            <  1:725285/291‑1 (MQ=255)                            ctGGAATTGTGAGAACGCCTGGGCGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCaaagatcggaagagcacacgtctgaactc                           >  3:96571/2‑274 (MQ=255)                                aaTTGTGAGAACGCCTGGGCGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCAAGGGGCTGGGGCTCGGGGCGATTCTGCTGAtc                       <  4:665888/301‑1 (MQ=255)                                 aTTGTGAGAACGCCTGGGCGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCAAGGGGCTGGGGCTCGGGGCGATTCTGCTGAtcg                      <  4:683090/301‑1 (MQ=255)                                 aTTGTGAGAACGCCTGGGCGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCCGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCAAggggctggggctagatcggaagagcacacgtc                      >  3:673724/1‑281 (MQ=255)                                     tgAGAACGCCTGGGCGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCAAGGGGCTGGGGCTCGGGGCGATTCTGCAGAtcggaag                  >  3:725301/1‑297 (MQ=255)                                      gagaACGCCTGGGCGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCAAGGGGCTGGGGCTCGGGGCGATTCTGCTGATCGTCGGc                 <  4:537273/301‑1 (MQ=255)                                      gagaACGCCTGGGCGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGCCGGCGGCAAGGGGCTGGGGCTCGGGGGGATTCTGCTGATCGTCGGc                 >  4:18329/1‑301 (MQ=255)                                         aaCGCCTGGGCGTGGCAGGCTGACGTGCAGTTTACGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATACCCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCAAGGGGCTGGGGCTCGGGGCGATTCTGCTGATCGTCGGCATc              <  2:434721/301‑1 (MQ=255)                                                gggCGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGACGGTGGCGGTTGCGGCATGCGCTTCGGCGGCGGCAAGGGGCTGGGGCTCGGGGCGATTCTGCTGATTGTCGGCCTCtgctggc       >  2:308503/1‑301 (MQ=255)                                                    gTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCAAGGGGCTGGGGCTCGGGGCGATTCTGCTGATCGTCGGCATCGGCTGGCTCAc   >  1:626312/1‑301 (MQ=255)                                                    gTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCAAGGGGCTGGGGCTCGGGGCGATTCTGCTGATCGTCGGCATCGGCTGGCTCAc   >  4:730836/1‑301 (MQ=255)                                                     tGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCAAGGGGCTGGGGCTCGGGGCGATTCTGCTGATCGTCGGCATCGGCTGGCTCAcc  >  1:317409/1‑301 (MQ=255)                                                     |                                                                                                                                                                                                                                                                                                             CCTGGGCGGGCATGCCGGTTTCCTCTCTTGGAATTGTGAGAACGCCTGGGCGTGGCAGGCGGACTTGCAGTTTCCGGCAGGTCGCGCGTGATGAATATTGAAATCGACCAACTCATACATAACCAAATGGTGATGTCTTAACACCTTTGCCTGACACCAGCCGCTTTCCTGAACTAATCTTTGTCTTCTTGTTTCACGCTCGGAGAGCATTCATGGAATGGCGAAAAGGCCGACGCAGCGACAACGTGGTCGATGCCCGGGGCGAAGGTGGCGGTGGCGGCATGCGCTTCGGCGGCGGCAAGGGGCTGGGGCTCGGGGCGATTCTGCTGATCGTCGGCATCGGCTGGCTCACC  >  AE015451/5282328‑5282680

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑