Predicted mutation
evidence seq id position mutation annotation gene description
JC AE015451 5,555,608 +GCC intergenic (‑84/+87) PP_4887 ← / ← PP_4888 conserved protein of unknown function/putative methyl‑accepting chemotaxis transducer

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 = 55556080 (0.000)75 (0.880)
+GCC
65/546 0.6 100% intergenic (‑84/+87) PP_4887/PP_4888 conserved protein of unknown function/putative methyl‑accepting chemotaxis transducer
?AE015451 5555609 = 0 (0.000)intergenic (‑85/+86) PP_4887/PP_4888 conserved protein of unknown function/putative methyl‑accepting chemotaxis transducer

GCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAAGGCCCGGGCCAGCCAGCCGGGGACGTCCGAGGTCATGGCGCAGTAGGCTTGCAGGGCGGTCATCGGGTCAGTGAGCCGTACGCTGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTACTGGCCGTGGTCTGCATCACCACCTCAGCCGAGCGTTCGGCCTGGGCATGGATGTTCTCCACCCGCCCCCGCACCGCCTGAGCGCCATGGGCCTGCTGTTCGGCAGCGCGAGTCGCCAAACCAATGGCCGCG  >  AE015451/5555318‑5555890
                                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                         
agtgaagccgtggatatcggcgacattgaaacggcgtgagttaaagtcgcgaatgcggaaggcccgggccagccagccggggacgtccgaggtcatggcgcagtaggcttgcagggcggtcatcgggtcagtgagccgtacgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggcccc                                                                                                                                                                                                                                                                                          <  1:783477‑M2/2‑1 (MQ=255)
agtgaagccgtggatatcggcgacattgaaacggcgtgagataaagtcgcgaatgcggaaggcccgggccagccagccggggacgtccgaggtcatggcgcagtaggcttgcagggcggtcatcgggtcagtgagccgtacgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggcccc                                                                                                                                                                                                                                                                                          >  2:783451‑M2/292‑293 (MQ=255)
         gtggatatcggcgacattgaaacggcgtgagataaagtcgcgaatgcggaaggcccgggccagccagccggggacgtccgaggtcatggcgcagtaggcttgcagggcggtcatcgggtcagtgagccgtacgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCa                                                                                                                                                                                                                                                                                      >  1:555087‑M2/283‑288 (MQ=255)
           ggatatcggcgacattgaaacggcgtgagataaagtcgcgaatgcggaaggcccgggccagccagccggggacgtccgaggtcatggcgcagtaggcttgcagggcggtcatcgggtcagtgagccgtacgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTcc                                                                                                                                                                                                                                                                                <  1:493141‑M2/12‑1 (MQ=255)
           ggatatcggcgacattgaaacggcgtgagataaagtcgcgaatgcggaaggcccgggccagccagccggggacgtccgaggtcatggcgcagtaggcttgcagggcggtcatcgggtcagtgagccgtacgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGAGTGTAt                                                                                                                                                                                                                                                                        >  2:248953‑M2/281‑300 (MQ=255)
           ggatatcggcgacattgaaacggcgggagataaagtcgcgaatgcggaaggcccgggccagccagccggggacgtccgaggtcatggcgcagtaggcttgcagggcggtcatcgggtcagtgagccgtacgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTa                                                                                                                                                                                                                                                                         <  2:414925‑M2/19‑1 (MQ=255)
                  ggcgacattgaaacggcgtgggataaagtcgcgaatgcggaaggcccgggccagccagccggggacgtccgaggtcatggcgcagtaggcttgcagggcggtcatcgggtcagtgagccgtacgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAAtt                                                                                                                                                                                                                                                                                   <  2:836892‑M2/9‑1 (MQ=255)
                     gacattgaaacggcgtgagataaagtcgcgaatgcggaaggcccgggccagccagccggggacgtccgaggtcatggcgcagtaggcttgcagggcggtcatcgggtcagtgagccgtacgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGcaa                                                                                                                                                                                                                                                                    <  1:598841‑M2/24‑1 (MQ=255)
                     gacattgaaacggcgtgagataaagtcgcgaatgcggaaggcccgggccagccagccggggacgtccgaggtcatggcgcagtaggcttgcagggcggtcatcgggtcagtgagccgtacgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAAcc                                                                                                                                                                                                                                                              >  1:315740‑M2/271‑300 (MQ=255)
                          tgaaacggcgtgagataaagtcgcgaatgcggaaggcccgggccagccagccggggacgtccgaggtcatggcgcagtaggcttgcagggcggtcatcgggtcagtgagccgtacgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTggg                                                                                                                                                                                                                                                          <  1:273303‑M2/34‑1 (MQ=255)
                          tgaaacggcgtgagataaagtcgcgaatgcggaaggcccgggccagccagccggggacgtccgaggtcatggcgcagtaggcttgcagggcggtcatcgggtcagtgagccgtacgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTggg                                                                                                                                                                                                                                                          <  1:290287‑M2/34‑1 (MQ=255)
                               cggcgtgagataaagtcgcgaatgcggaaggcccgggccagccagccggggacgtccgaggtcatggcgcagtaggcttgcagggcggtcatcgggtcagtgagccgtacgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCgtgt                                                                                                                                                                                                                                                                          >  1:285895‑M2/261‑278 (MQ=255)
                                           aagtcgcgaatgcggaaggcccgggccagccagccggggacgtccgaggtcatggcgcagtaggcttgcagggcggtcatcgggtcagtgagccgtacgctgtcactgagcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGc                                                                                                                                                                                                                                                <  2:554649‑M2/44‑1 (MQ=255)
                                                  gaatgcggaaggcccgggccggccagccggggacgtccgaggtcatggcgcagtaggcttgcagggcggtcatcgggtcagtgagccgtacgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGgctgct                                                                                                                                                                                                                                                    <  1:333345‑M2/40‑1 (MQ=255)
                                                      gcggaaggcccgggccagccagccggggacgtccgaggtcatggcgcagtaggcttgcagggcggtcatcgggtcagtgagccgtacgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTa                                                                                                                                                                                                                                                   <  2:19631‑M2/41‑1 (MQ=255)
                                                      gcggaaggcccgggccagccagccggggacgtccgaggtcatggcgcagtaggcttgcagggcggtcatcgggtcagtgagccgtacgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATg                                                                                                                                                                                                                                                 <  2:315732‑M2/43‑1 (MQ=255)
                                                      gcggaaggcccgggccagccagccggggacgtccgaggtcatggcgcagtaggcttgcagggcggtcatcggggcagtgagccgtacgctggcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttctgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCa                                                                                                                                                                                                                                                                                      <  2:555066‑M2/6‑1 (MQ=255)
                                                        ggaaggcccgggccagccagccggggacgtccgaggtcatggcgcagtaggcttgcagggcggtcatcgggtcagtgagccgtacgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGca                                                                                                                                                                                                                                                                     <  2:285888‑M2/23‑1 (MQ=255)
                                                              cccgggccagccagccggggacgtccgaggtcatggcgcagtaggcttgcagggcggtcatcgggtcagtgagccgtacgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACCAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACaa                                                                                                                                                                                                                     >  2:162659‑M2/230‑300 (MQ=255)
                                                                              ggggacgtccgaggtcatggcgcagtaggcttgcagagcggtcatcgggtcagtgagccgtacgctgtccctgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTc                                                                                                                                                                                                    <  1:48798‑M2/88‑1 (MQ=255)
                                                                                          ggtcatggcgcagtaggcttgcagggcggtcatcgggtcagtgagccgtacgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCa                                                                                                                                                                                                                                               <  1:376699‑M2/45‑1 (MQ=255)
                                                                                          ggtcatggcgcagtaggcttgcagggcggtcatcgggtcagtgagccgtacgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCa                                                                                                                                                                                                                                               >  2:376687‑M2/202‑246 (MQ=255)
                                                                                                         ggcttgcagggcggtcatcgggtcagtgagccgtacgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCCGCCCTTTCGCGACACAAGGCCCACaa                                                                                                                                                                                                                     >  2:420322‑M2/187‑257 (MQ=255)
                                                                                                                  ggcggtcatcgggtcagtgagccgtacgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAg                                                                                                                                                                <  1:59343‑M2/124‑1 (MQ=255)
                                                                                                                           cgggtcagtgagccgtacgctgtcactgtgcaggaaattccggtcggcctgggcagcgcttagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGcaaca                                                                                                                                                                                                                                                                  <  2:332382‑M2/26‑1 (MQ=255)
                                                                                                                                         gtacgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCtt                                                                                                                                          >  1:455896‑M2/155‑300 (MQ=255)
                                                                                                                                          tacgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggaggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGgc                                                                                                                                                                           >  1:191422‑M2/154‑266 (MQ=255)
                                                                                                                                            cgctgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCt                                                                                                                                       <  1:248959‑M2/149‑1 (MQ=255)
                                                                                                                                                gtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTAc                                                                                                                                     <  1:32428‑M2/151‑1 (MQ=255)
                                                                                                                                                gtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTAc                                                                                                                                     <  1:162663‑M2/151‑1 (MQ=255)
                                                                                                                                                  cactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCCACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACACAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGc                                                                                                                                                                               >  2:704631‑M2/146‑254 (MQ=255)
                                                                                                                                                  cactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCg                                                                                                                                                                                             <  2:810625‑M2/95‑1 (MQ=255)
                                                                                                                                                   actgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTAc                                                                                                                                     >  1:87234‑M2/145‑295 (MQ=255)
                                                                                                                                                        gcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaacgcctttggtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCt                                                                                                                                                                   <  2:242675‑M2/121‑1 (MQ=255)
                                                                                                                                                          aggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGccc                                                                                                                                                                                   >  2:37228‑M2/138‑242 (MQ=255)
                                                                                                                                                          aggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTg                                                                                                                                                                             <  1:37230‑M2/111‑1 (MQ=255)
                                                                                                                                                           ggaaattcaggtcggcatgggcagcgattagtcgggcggaaatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTACTgg                                                                                                                                  <  1:420342‑M2/154‑1 (MQ=255)
                                                                                                                                                            gaaattcaggtcggcctgggcagcgagtagtcgggcggacatgggcaactccttttgtcatgtgtcgccgacagcatagaaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTACTGGCCGTGGTCt                                                                                                                         <  2:455876‑M2/163‑1 (MQ=255)
                                                                                                                                                                         gcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACCAGGCCCACAAAgg                                                                                                                                                                                                                  >  2:620417‑M2/123‑196 (MQ=255)
                                                                                                                                                                         gcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTAc                                                                                                                                     <  1:620442‑M2/151‑1 (MQ=255)
                                                                                                                                                                            tgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCCTCAGGCCCGGAACTGGccc                                                                                                                                                                                   >  2:451789‑M2/120‑224 (MQ=255)
                                                                                                                                                                                  gcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgttcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCa                                                                                                                                                 <  2:509834‑M2/139‑1 (MQ=255)
                                                                                                                                                                                           cgggcggacatgagcaagtccttttgtcatgtgtcgctgacagcatagcaacgccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCGGGCAATTTCCGCGTGTATGCAAAAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCt                                                                                                                                                                                                      <  2:911115‑M2/86‑1 (MQ=255)
                                                                                                                                                                                           cgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACCCAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGgcgc                                                                                                                                                                         >  2:223826‑M2/105‑219 (MQ=255)
                                                                                                                                                                                           cgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCtt                                                                                                                                          <  1:223831‑M2/146‑1 (MQ=255)
                                                                                                                                                                                           cgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTAc                                                                                                                                     <  2:87232‑M2/151‑1 (MQ=255)
                                                                                                                                                                                               cggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGgcgc                                                                                                                                                                         >  2:686589‑M2/101‑215 (MQ=255)
                                                                                                                                                                                                   catgggcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCa                                                                                                                                                 <  2:650596‑M2/139‑1 (MQ=255)
                                                                                                                                                                                                   catgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCa                                                                                                                                                 >  1:650621‑M2/97‑235 (MQ=255)
                                                                                                                                                                                                     tgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCt                                                                                                                                                                              >  2:787812‑M2/95‑204 (MQ=255)
                                                                                                                                                                                                     tgagcaacccctttggtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTACTGGCCGTGGTCTGCATCACCACCTCAGCCGAGCGTTCGGCCTGGGCATg                                                                                    <  1:787838‑M2/200‑1 (MQ=255)
                                                                                                                                                                                                         caactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCtt                                                                                                                                          >  2:146538‑M2/91‑236 (MQ=255)
                                                                                                                                                                                                           actccttttgtcatgtgtcgccgacagcctagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcagccCCGGCAATTTCCGGGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTc                                                                                                                                                                                                    <  2:24893‑M2/88‑1 (MQ=255)
                                                                                                                                                                                                              ccttttgtcatgtgtggccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTACTGGCCGTGGTCTGCATCACCACCTCAGCCGAGCGTTCGGCCTGGGCATGGATGTTCTCCACCCg                                                                     <  1:146541‑M2/215‑1 (MQ=255)
                                                                                                                                                                                                               cctttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGgc                                                                                                                                                                           >  2:410637‑M2/85‑197 (MQ=255)
                                                                                                                                                                                                                    gtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTACTGGCCGTGGTCTGCATCACCACCTCAGCCGAGCGTTCGGCCTGGGCATGGATGTTCTCCACCCGCCCCCg                                                               >  1:744898‑M2/80‑300 (MQ=255)
                                                                                                                                                                                                                               ccgacagcatagcaacaccgctcaggtttgggagcggccttgggtcgcgaaaaggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAg                                                                                                                                                                <  1:667738‑M2/124‑1 (MQ=255)
                                                                                                                                                                                                                                    agcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTACTGGCCGTGGTCTGCATCaccacc                                                                                                              >  2:903796‑M2/64‑237 (MQ=255)
                                                                                                                                                                                                                                       atagcaacaccgctcaggtgtgggagcggccttgggtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTACTGGCCGTGGTCTGCATCACCACCTCAGCCGAGCGTTCGGCCTGGGCATGGATGTTCTCCACCCGCCCCCGCACCGCCTGAgc                                                   <  2:744872‑M2/233‑1 (MQ=255)
                                                                                                                                                                                                                                         agcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTACTGGCCGTGGTCTGCATCACCACCTCAGCCGAGCGTTCGGCCTGGGCATGGATGTTCTCCACCCGCCCCCGCACCGCCTGAgc                                                   <  1:410656‑M2/233‑1 (MQ=255)
                                                                                                                                                                                                                                            aacaccgcgaaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCGGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGatcat                                                                                                                                                    <  2:648944‑M2/136‑1 (MQ=255)
                                                                                                                                                                                                                                                  gctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCACACAAAGGAACGCGCAGGCTTCAGGCCCGGAACTGGCCAAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTACTGGCCGTGGTCTGCATAACCACCTCAGCCGAGCGTTCGGCCTGGGCATGGATGTTCTCCACCCGCCCCCGCACCGCCTGAGCGCCATGGGCCTGCTGTTc                                 >  2:61296‑M2/50‑300 (MQ=255)
                                                                                                                                                                                                                                                     caggtgtgggggcggccttgggtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTACTGGCCGTGGTCTGCATcacca                                                                                                                <  2:191418‑M2/172‑1 (MQ=255)
                                                                                                                                                                                                                                                      aggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTACTGGCCGTGGTCTGCATCCCCACCTCCGCCGAGCGTTCGGCCt                                                                                           >  1:143754‑M2/46‑238 (MQ=255)
                                                                                                                                                                                                                                                       ggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTTGCGCGCAGCTGAGCCGCCAGAACCTCCAGCACCTTGCTACTGGCCGTGGTCTGCATCACCACCTCAGCCGAGCGTTCGGCCTGGGCATGGATGTTCTCCACCCGCCCCCGCACCGCCTGAGCGCCATTGGCCTGCTGTTCGGc                              >  1:259987‑M2/45‑298 (MQ=255)
                                                                                                                                                                                                                                                            gggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTACTGGCCGTGGTCTGCATCACCACCCCAGCCGAGCGTTCGGCCTGGGCATGGATGTTCTCCACCCGCCCCCGCACCGCCTGAGCGCCATGGGCctgct                                     >  1:811512‑M2/40‑286 (MQ=255)
                                                                                                                                                                                                                                                                gcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTACTGGCCGTGGTCTGCATCACCACCTCAGCCGAGCGTTCGGCCTGGGCATGGATGTTCTCCACCCGCCCCCGCACCGCCTGAGCGCCATGGGCCTGCTGTTCGGc                              <  1:372638‑M2/254‑1 (MQ=255)
                                                                                                                                                                                                                                                                  ggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTACTGGCCGTGGTCTGCATCACCACCTCAGCCGAGCGTTCGGCCTGGGCATGGATGTTCTCCACCCGCCCCCGCACCGCCTGAGCGcc                                                >  2:54621‑M2/34‑269 (MQ=255)
                                                                                                                                                                                                                                                                     cttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTACTGGCCGTGGTCTGCATCACCACCTCAGCCGAGCGTTCGGCCTGGGCATGGATGTTCTCCACCCGCCCCCGCACCGCCTGAGCGCCATGGGCCTGCTGTTCGGCAGCGCGAGTCGCCaa               >  1:323506‑M2/31‑299 (MQ=255)
                                                                                                                                                                                                                                                                     cttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCACGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTACt                                                                                                                                    >  2:547004‑M2/31‑182 (MQ=255)
                                                                                                                                                                                                                                                                            cgcgaaagggccgcagagcggccCCGGCAATTCCCGGGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCATTTCGCGAAACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTACTGGCCGTGGTCTGCATCACCACCTCAGCCGAGCGTTCGGCCTGGGCATGGATGTTCTCCACCCGCCCCCGCACCGCCTGAGCGCCATGGGCCTGCTGTTCGGCAGCGCGAGTCGcc                 <  2:259981‑M2/267‑1 (MQ=255)
                                                                                                                                                                                                                                                                               gaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTACTGGCCGTGGTCTGCATCACCACCTCAGCCGAGCGTTCGGCCTGGGCATGGATGTTCTCCACCCGCCCCCGCACCGCCTGAGCCCCATGGGCCTGCTGTTCGGCAGCGCGAGTCGCCAAAcc            >  2:853104‑M2/21‑292 (MQ=255)
                                                                                                                                                                                                                                                                                aaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTACTGGCCGTGGTCTGCATCACCACCTCAGCCGAGCGTTCGGCCTGGGCATGGATGTTCTCCACCCGCCCCCGCAc                                                            <  1:451809‑M2/224‑1 (MQ=255)
                                                                                                                                                                                                                                                                                    ggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTACTGGCCGTGGTCTGCATCACCACCTCAGCCGAGCGTTCGGCCTGGGCATGGATGTTCTCCACCCGCCCCCGCACCGCCTGAGCGCCATGGGCCTGCTGTTCGGCAGCGCGAGTCGCCAAACCAATGGCcgcg  >  1:365516‑M2/16‑297 (MQ=255)
                                                                                                                                                                                                                                                                                          atagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACATTGCTAATGGCCgtggtctgcatgaccacataagcagagc                                                                                                    >  2:589457‑M2/10‑182 (MQ=255)
                                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                         
GCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAAGGCCCGGGCCAGCCAGCCGGGGACGTCCGAGGTCATGGCGCAGTAGGCTTGCAGGGCGGTCATCGGGTCAGTGAGCCGTACGCTGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTACTGGCCGTGGTCTGCATCACCACCTCAGCCGAGCGTTCGGCCTGGGCATGGATGTTCTCCACCCGCCCCCGCACCGCCTGAGCGCCATGGGCCTGCTGTTCGGCAGCGCGAGTCGCCAAACCAATGGCCGCG  >  AE015451/5555318‑5555890

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.