| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 5496516 = | 104 (1.530) | 4 (0.060) | 4/578 | 6.2 | 3.8% | coding (169/1332 nt) | cobG | putative precorrin‑3B synthase |
| ? | AE015451 | = 5496512 | 102 (1.550) | coding (173/1332 nt) | cobG | putative precorrin‑3B synthase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGCGGGCGAGCCCGTGAAGAAGGCGACGCGGTCCTGAATTTCTACTTGATCGCCGAGGATGCTCGACCACCGGCTTTTCATGCCGCCGGACAAAGCAGGCATAATACCGCGCCTTCTACACTCAAGCGCACTTTCACAGATTGCCGGACACCCCATTGACCCAGGCCGAAGCCCCCACTGTCATCCCTCGTCCCTCGGCCTGCCCGGGGTTGTGGCGCATCGTCAGTGCCCGTGATGGCGGTATCTGCCGCATCAAGCTGCCGGGTGGCCTGCTGCTGGCCGAGCAGGCTGAAGCCGTGGCGGCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5496824‑5496516‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcggcggAGCGTTTTGCTGGCGGCGTGATCGAGGCCACCAACCGTGGCAACCTGCAGATTCGTGGCATTGGCAGCGAGCATCGCGCTTTGGTCGAGGCACTGCTCGCAGCCGGCCTGGGACCACGCGATGCCGCGGGTGACGATGTGCGCAACGTGATGCTCAGCCCACTGGCCGGGCATGACCCGCTCATGCTGCTGGACGCCAGGCCGCTGGCCGGGCAGATCCTCGACCTGTTGGAAGGCACCCCGCGCTTTCACCAGCTGTCGGCCAAGTTCGCTGTGCAGCTGGATGCAGGC < AE015451/5496512‑5496223 ccgatctGAGCCCGTGAAGAAGGCGACGCGGTCCTGAATTTCTACTTGATCGCCGAGGATGCTCGACCACCGGCTTTTCATGCCGCCGGACAAAGCAGGCATAATACCGCGCCTTCTACACTCAAGCGCACTTTCACAGATTGCCGGACACCCCATTGACCCAGGCCGAAGCCCCCACTGTCATCCCTCGTCCCTCGGCCTGCCCGGGGTTGTGGCGCATCGTCAGTGCCCGTGATGGCGGTATCTGCCGCATCAAGCTGCCGGGTGGCCTGCTGCTGGCCGAGCAGGCTGAAGCCGTGGC < 1:468970/294‑1cccgccctgccgatcGAAGAAGTCGACTCGTTCCTGAATTTCTACTTGATCGCCGAGGATGCTCGACCACCGGCTTTGCATGCCGCCGGACAAAGCAGGCATAATACCGCGCCTTCTACACTCAAGCGCACTTTCACAGATTGCCGGACACCCCATTGACCCAGGCCGAAGCCCCCACTGTCATCCCTCGTCCCTCGGCCTGCCCGGGGTTGTGGCGCATCGTCAGTGCCCGTGATGGCGGTATCTGCCGCATCAAGCTGCCGGGTGGCCTGCTGCTGGCCGAGCAGGCTGAAGCCGTGGC < 2:303069/286‑1 GCGAGCCCGTGAAGAAGGCGACGCGGGCCTGAATTTCTACTTGATCGCCGAGGATGCTCGACCACCGGCTTTTCATGCCGCCGGACAAAGCAGGCATAATACCGCGCCTTCTACACTCAAGCGCACTTTCACAGATTGCCGGACACCCCATTGACCCAGGCCGAAGCCCCCACTGTCATCCCTCGTCCCTCGGCCTGCCCGGGGTTGTGGCGCATCGTCAGTGCCCGTGATGGCGGTATCTGCCGCATCAAGCTGCCGGGTGGCCTGCTGCTGGCCGAGCAGGCTGAAGCCGTGGCGGCGG < 2:745945/301‑1 GAGCCCGTGAAGAAGGCGACGCGGTCCTGAATTTCTACTTGATCGCCGAGGATGCTCGACCACCGGCTTTTCATGCCGCCGGACAAAGCAGGCATAATACCGCGCCTTCTACACTCAAGCGCACTTTCACAGATTGCCGGACACCCCATTGACCCAGGCCGAAGCCCCCACTGTCATCCCTCGTCCCTCGGCCTGCCCGGGGTTGTGGCGCATCGTCAGTGCCCGTGATGGCGGTATCTGCCGCATCAAGCTGCCGGGTTGCCTGCTGCTGGCCGAGCAGGCTGAAGCCGTGGCagatcgg > 2:468812/1‑294 AGCCCGTGAAGAAGGCGACGCGGTCCTGAATTTCTACTTGATCGCCGAGGATGCTCGACCACCGGCTTTTCATGCCGCCGGACAAAGCAGGCATAATACCGCGCCTTCTACACTCAAGCGCACTTTCACAGATTGCCGGACACCCCATTGACCCAGGCCGAAGCCCCCACTGTCATCCCTCGTCCCTCGGCCTGCCCGGGGTTGTGGCGCATCGTCAGTGCCCGTGATGGCGGTATCTGCCGCATCAAGCTGCCGGGTGGCCTGCTGCTGGCCGAGCAGGCTGAAGCCGTGGCGGCGGCGG > 1:802780/1‑301 AAGAAGGCGACGCGGTCCTGAATTTCTACTTGATCGCCGAGGATGCTCGACCACCGGCTTTTCATGCCGCCGGACAAAGCAGGCATAATACCGCGCCTTCTACACTCAAGCGCACTTTCACAGATTGCCGGACACCCCATTGACCCAGGCCGAAGCCCCCACTGTCATCCCTCGTCCCTCGGCCTGCCCGGGGTTGTGGCGCATCGTCAGTGCCCGTGATGGCGGTATCTGCCGCATCAAGCTGCCGGGTGGCCTGCTGCTGGCCGAGCAGGCTGAAGCCGTGGCagatcggaagagcaca > 1:303175/1‑285 ACAGATTGCCGGACACCCCATTGACCCAGGCCGAAGCCCCCACTGTCATCCCTCGTCCCTCGGCCTGCCCGGGGTTGTGGCGCATCGTCAGTGCCCGTGATGGCGGTATCTGCCGCATCAAGCTGCCGGGTGGCCTGCTGCTGGCCGAGCAGGCTGAAGCCGTGGCGGCGGCGGAGCGTTTTGCTGGCGGCGTGATCGAGGCCACCAACCGTGGCAACCTGCAGATTCGTGGCATTGGCAGCGAGCATCGCGCTTTGGTCGAGGCACTGGTCCCAGCCGGCCTGGGACCACCCGTTGCCcc > 2:15707/1‑299 GCCGACGCCCCCACTGTCATCCCTCGTCCCTCGGCCTGCCCGGGGTTGTGGCGCATCGTCAGTGCCCGTGATGGACGTATCTGCCGCATCAAGCTGCCGGGTGGCCTGCTGCTGGCCGAGCAGGCTGAAGCCGTGGCGGCGGCGGAGCGTTTTGCTGGCGGCGTGATCGAGGCCACCAACCGTGGCAACCTGCAGATTCGTGGCATTGGCAGCGAGCATCGCGCTTTGGTCGAGGCACTGCTCGCAGCCGGCCTGGGACCACGCGATGCCGCGGGTGACGATGTGCGCAACGTGATGCTCA < 1:624569/301‑1 CGCATCAAGCTGCCGGGTGGCCTGCTGCTGGCCGAGCAGGCTGAAGCCGTGGCGGCGGCGGAGCGTTTTGCTGGCGGCGTGATCGAGGCCACCAACCGTGGCAACCTGCAGATTCGTGGCATTGGCAGCGAGCATCGCGCTTTGGTCGAGGCACTGCTCGCAGCCGGCCTGGGACCACGCGATGCCGCGGGTGACGATGTGCGCAACGTGATGCTCAGCCCACTGGCCGGGCATGACCCGCTCATGCTGCTGGACGCCAGGCCGCTGGCCGGGCAGATCCTCGACCTGTTGGAAGGCACCC < 1:15709/301‑1 gcagggGTGGCGGCGGGGGCGCGGTTTGCTGGGGGCGTGGTACAGGCCACCAACCGTGGAAACCTGCAGATTCGTGGCATTGGCAGCGAGCATCGCGCTTTGGGCGAGGCACTGCTCGCAGCCGGCCTGGGACCACGCGATGCCGCGGGTGACGATGTGCGCAACGTGATGCTCAGCCCACTGGCCGGGCATGACCCGCTCATGCTGCTGGACGCCAGGCCGCTGGCCGGGCAGATCCTCGACCTGTTGGAAGGCACCCCGCGCTTTCACCAGCTGTCGGCCAAGTTCGCTGTGCAGCTGG < 2:17405/295‑1 GGCGGCGGCGGAGCGTTTTGCTGGCGGCGTGATCGAGGCCACCAACCGTGGCAACCTGCAGATTCGTGGCATTGGCAGCGAGCATCGCGCTTTGGTCGAGGCACTGCTCGCAGCCGGCCTGGGACCACGCGATGCCGCGGGTGACGATGTGCGCAACGTGATGCTCAGCCCACTGGCCGGGCATGACCCGCTCATGCTGCTGGACGCCAGGCCGCTGGCCGGGCAGATCCTCGACCTGTTGGAAGGCAGCCCGCGCTTTCACCAGCTGTCGGCAAAGTTCGCTGGGCAGCTGGATGCAGGg > 2:851821/1‑300 GGCGGCGGCGGAGCGTTTTGCGAGCGGCTGGATCGAGGCCACCAACCGTGGCAACGTGCAGAGTCGTGGCATTGGCAGCGAGCATCGCGCTTTGGTCGGGGCACTGCTCGCAGCCGGCCTGGGAGCACGCGATGCCGCGGGTGACGATGTGCGCAACGTGATGCTCAGCCCACTGGCCGGGCATGACCCGCTCATGCTGCTGGACGCCAGGCCGCTGGCCGGGCACATCCTCGACCTGTTGGAAGGCACCCCGCGCTTTCACCAGCTGTCGGCCAAGTTCGCTGTGCAGCTGGATGCAGGC < 2:449192/301‑1 AGCGGGCGAGCCCGTGAAGAAGGCGACGCGGTCCTGAATTTCTACTTGATCGCCGAGGATGCTCGACCACCGGCTTTTCATGCCGCCGGACAAAGCAGGCATAATACCGCGCCTTCTACACTCAAGCGCACTTTCACAGATTGCCGGACACCCCATTGACCCAGGCCGAAGCCCCCACTGTCATCCCTCGTCCCTCGGCCTGCCCGGGGTTGTGGCGCATCGTCAGTGCCCGTGATGGCGGTATCTGCCGCATCAAGCTGCCGGGTGGCCTGCTGCTGGCCGAGCAGGCTGAAGCCGTGGCGGCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5496824‑5496516‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcggcggAGCGTTTTGCTGGCGGCGTGATCGAGGCCACCAACCGTGGCAACCTGCAGATTCGTGGCATTGGCAGCGAGCATCGCGCTTTGGTCGAGGCACTGCTCGCAGCCGGCCTGGGACCACGCGATGCCGCGGGTGACGATGTGCGCAACGTGATGCTCAGCCCACTGGCCGGGCATGACCCGCTCATGCTGCTGGACGCCAGGCCGCTGGCCGGGCAGATCCTCGACCTGTTGGAAGGCACCCCGCGCTTTCACCAGCTGTCGGCCAAGTTCGCTGTGCAGCTGGATGCAGGC < AE015451/5496512‑5496223 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |