Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AE015451 | 196,795 | 0 | G | C | 23.4% | 109.5 / 30.7 | 81 | T767T (ACG→ACC) | PP_0168 | putative surface adhesion protein |
Reads supporting (aligned to +/- strand): ref base G (22/37); new base C (8/10); total (33/48) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.93e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
GGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCA‑GCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACC > AE015451/196498‑197095 | ggctctgcccACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGGCGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATGCCGTAGACGGTGACCCTGAGCAATCCTGCCGAGAGGCGGGTGACAGTGACCCTGTCCGACTGCCAAACCATTACCGTTGAAGCCGGCAAGACCGAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCg < 1:684924/293‑1 (MQ=14) ggCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGCCGGCGAACCCGTCTGTCACCGAAGGCGGCGTTATCACCTCCACCGTTACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAACTGACCTCGAACCCGACGCCg > 1:692291/1‑301 (MQ=11) gCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAACTGACCCCGAACCCGACCCCgg > 1:674436/1‑301 (MQ=18) cTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑c < 1:263025/301‑1 (MQ=40) aaGACCACGATCAACGACGCGGTCGATGCCACCACCCCGACCCTCACGGCGAGCCCCTCGGTCCCCGGAGTCGGCGTTATCACCTACCGCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAACTCATTGTCGTTGATGATGCCAAGACCCACGGCAGCGACACTGTCCCCATACCCGCGG‑CTGTTGCGAACAAC‑AACGGTTCGACTG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTc < 2:825698/300‑1 (MQ=9) aCCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACAGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAATCCGACCCCGG‑CTCaca > 1:209577/1‑299 (MQ=9) atcacGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTc < 2:202455/297‑1 (MQ=255) gTCGATGCCACCACCGCGACCCTGACGGCGAGCGCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCgg < 1:725581/301‑1 (MQ=255) ggatgcaaccgccgcgcaccggacgggtaGCCGGTCGGTCACCGAAGACGGCGTGATCACCTGCGCCGTGACGGTGAGCAATCCTGCCCGGGCTCCGGTGGCAGTGGCCCGGTCCCACGGCCACACCAGTACCGTTGAAGCCGGCAAGAAACAATGCAGCTCCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AGCGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGGGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTc < 1:81738/273‑1 (MQ=9) cGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTcagac > 1:202524/1‑297 (MQ=255) gATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAACGTCGATTTCCAGCCCCCGTCAA‑CTGACGTCTACTAC‑AACGCTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCAAGAACGCCACTGGCGGCA‑ACTT‑‑CGCACATCTGACCCCGACCCCGACCCCGG‑CTCAGACCAAGATCAACGACTCCGTcc > 1:68570/1‑300 (MQ=11) gATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATGCTCCGGAGACGCCGCCGACAGCGCCCCTGTCCAACGATCAAAGCATTACAGTCGACGCCGGCATGACCGAGGGCAACGTAGCTTTCCAGACCCCGGCGA‑CTGACGTCCACCAC‑AACGAGTCTACCG‑TCAGCG‑‑‑TC‑ACCATCCAGAGCGCCCCAGGC‑GCACACTT‑‑CGGACAGCTGACCCAGAACCAGACCACGA‑CCCAGGCCACGATCAACGCCTCGGtag > 1:412444/1‑299 (MQ=2) aTGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTGCAACGGCCAAACCACTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGA‑TTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGAt < 1:63937/301‑1 (MQ=255) cgcgACACTGACGGCGACCCCATCGGTCACCGAAGGCCGCGTGATCACCTACACCGTGACCCTCAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCaccacc < 2:874093/301‑1 (MQ=255) ggaaggCGAGCACGTAGGTAAACGAAGGCGACGTGAGCACCTACACCGTGACCCTGAGCAATCCTGCTCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGACGGCAAGACTCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AAAGGTTCGACCG‑TCAGCG‑‑‑TC‑AGCATCGAGAACGTCACTGGCGGCA‑AGTT‑‑CGAACAGCTGACGCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCAACCCt < 1:844862/297‑1 (MQ=14) gcgcgtgggTCACCGAAGGCGGAGTAATCCCCTGCACCGTGACCCGGAGCAAGCCTGACCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGAATGACTCATTGCATCATGGTACTGC‑GACCCCCGAGATCTACCCTCTTTCCC‑TACACGTCGCTCG‑TCCG‑A‑‑‑TCTACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAGCAGCTGACCCCGAACCCGACCCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAg < 2:104651/294‑1 (MQ=2) gTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGACATCA‑GCTG‑‑CGAACAGGTGTCCACTAACGCCAC‑CCGGACTCAGACCACGATCAGCCACCCGCTCGATAACACAACCGCGACCCTGACGGCGAccccc > 1:661880/1‑300 (MQ=11) gcggcgTGACCACCTGCGCCGTGACCCTGAGCAATACTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGTGCAGCGTCGGTTTCCATACCCCGGCGA‑ATGACTTTTATTTCTAATGATCCG‑CCGACCACCGAGATC‑TACA‑CTCTTTCCCTACCCGACGCT‑CCTC‑‑CG‑‑‑ATCTGACCCCGAATCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAgg < 2:65637/301‑1 (MQ=2) ggTGATCACCTTCGCCGTGACCCTGAGCAATCCGGCCCAGACGCCGGGGACAGTGACCCTTTCCATGGGTGAAGCCATGACCGGTGCAGCCGCCAAGACCCAGTGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCAGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAggcggc < 1:608315/300‑1 (MQ=14) ctccgagcctctgaccaaaccatcccAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTac < 1:38583/278‑1 (MQ=255) ccgtacacgacgctagcccgacccgaagCCGGGGACAGTGACCCTGTCCAACGGCGAAACCATTACCGGTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTAGAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAGTCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACAcc < 2:745065/274‑1 (MQ=14) cGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAACCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTCCAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAATCCGACGCCGG‑CTCAGACCACCAGCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGACCCCGCCGGTcctgccagcccgcgtcggcacctccacc > 1:387466/1‑274 (MQ=11) cGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCATTGAAGCCGGCAACACCCAGGGCAGCGACTAATTCGAGACCACGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACCGGCGGCA‑ACTT‑‑CGAACATCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCACCGACTCGGTCGATACCACCACCGCGACCCTGACGGCGAGGCCGTCGGTCACCGAAGGCAGCGTGATCACCTACAcc > 1:574798/1‑301 (MQ=11) gCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAAAGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCTTCTATTTCCAGACCCCGGCGA‑ATGAACTCTATAAC‑AACGGTTCGCCCG‑ACAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAg < 1:420924/301‑1 (MQ=14) cAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCA‑ATGACGTCTACAAC‑AACGGCTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAGCGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGc > 1:414646/1‑301 (MQ=9) ccAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ATTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTAGGTCGATGCCACCACCGCGACCCTGACGGCGAGCGCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGAcccgatcggaatagcgc > 2:636207/1‑287 (MQ=255) ccAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAGCAGCTGACCCCGAACCCGACCCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGTCGGCGTGATCACCTCCACCGTGCCCCTGAGccaccccgcc > 2:548631/1‑292 (MQ=255) ctaatgCCGGTTACAGTGGCCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑GACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAGCCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGTCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGccc < 1:491048/296‑1 (MQ=255) aactccggttacactgcaccTGTCCAACGGCCAAACCATTCCCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCTGTA‑ATTT‑‑CGAGCAGCTGACCGCGAACCCGACGACGG‑CGCAGAACTCGAGTACAGACGCGTTCGATGCCACCATCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAg < 1:514037/283‑1 (MQ=11) cGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAAGGCCGCGACGATTTACATACCCAGGCCA‑ATCACGTCTACAAC‑AACCGTTCGACCG‑CCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACCCGGTCGATGCAACCACCGCAACCCTGACGGCGAGCCCGCCGGTCACCGACGGCGGCCTGATCACCTACACCCTGACCCTGAGC‑AATCCTGCCCAgccgcc > 1:235759/1‑301 (MQ=14) ggTGACCCTGTACAAGGGCAAAACCGTTACCGGGGAAGCAGACAAGTCCCAGTCCGACGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ATTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACa < 1:517145/300‑1 (MQ=11) cgTGACCCTGTCCAACGGCCAAACCGTTACCGTTGAAGCAGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGTCTT‑TCAGAT‑‑‑GA‑ACCAGCGACCAC‑CGA‑GATCTACACACTTTCCCTACA‑CGGCGCTCTTCCGCGCCGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGC‑AACCCTGCCCAGACGCCGGTGAcc < 2:341957/300‑2 (MQ=2) gACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACAGGCGGCA‑ACTT‑‑CGAACACGTGACCCCGAACGCGACACCGG‑CACACACCACAATCAACGACTCATTCGATCTCATCACCGCGACCCTGACGGCCAGCCCATCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGAAGCCGGTGACAGTg > 1:522176/1‑301 (MQ=11) ccTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCATGACACTGAGC‑AATACTCCCCAGACGCCGCTGACAGTGAcc > 1:95148/1‑301 (MQ=255) ccgttctaaaCCATTACCTTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTG‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCa < 2:779620/294‑1 (MQ=255) tcttccgatcttACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACg < 1:142637/291‑1 (MQ=255) aaaCCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCaagatcgg > 1:779891/1‑295 (MQ=255) aaaCCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCCG‑CTAAGACAACGACCAACAACTCGGTCGATTCCCCCCCCCCGACCCTGACGACGAACCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTTAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGGCCAACGTCCa > 1:114740/1‑301 (MQ=14) tACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCC‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGTCGTGATCACCTCCACCCTGACCCTGACC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACgacatcggtagc > 2:142587/1‑290 (MQ=14) aaGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑CCCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGa > 1:182729/1‑301 (MQ=38) aaGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACCGGCGGTA‑ACTT‑‑CGAACAGCTGACCCCGAATCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGa > 2:72072/1‑301 (MQ=9) cGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGcc < 1:72091/301‑1 (MQ=38) aacaCCCAGGGCAGCGTCGATGTCCAGGCCCCGGCCA‑ATGACGTCTACAAC‑AACGGTTCGAACG‑TCAGCG‑‑‑TC‑ACCATCGAGCACGCCACCGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACGCGGTCGATGCCACCACCGCGACCCTGACAGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCGCCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCa < 1:623764/298‑1 (MQ=11) ctgcccaaccagcccgtcccccgcgctggCGA‑ACGACGTCTACAAC‑AACTGTTCGACCG‑TCAGAG‑‑‑TC‑ACCATCGCGAACGCCGCTGGCGGTA‑ACTT‑‑CGAGCAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGCCTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCACACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGAcc < 2:691661/274‑1 (MQ=11) aGGGCAGCGTCGCTTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ATTT‑‑CGAACAGCTGACCCCGAACCCTACTCCTT‑CTCAGAACACGATCGCCTACTCGGTTGCTGCCGCCACCTCGAGTCCAACGGCGTGCCCTTCCGTTATCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCa < 1:590560/301‑1 (MQ=11) aGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACTCCGG‑CTCAGACCACGATCAACGACTCGTTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAATCCGGCAAGACCCa > 1:473018/1‑301 (MQ=255) gggCAGCGTCGATTTCCCGACCCCGGCGA‑AGGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACAGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAg < 2:472860/301‑1 (MQ=255) cccgcttttccgatccccGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGTA‑ACTT‑‑CGAGCAACTGACCCCGAACCCGACCCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGc < 2:217278/287‑1 (MQ=11) aGACCCCGGCGA‑ATGACGTCTACAAC‑ACCGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACAGGCGGTA‑ACTT‑‑CGAGCAACTGACCCCGAACCCGACCCCGG‑CTCAGACCACGATCAACGACGCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCCTGACCCTGAGC‑AACCCTGCCCAGACGCCGGTGACCGTGGCCCTGCCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCa < 1:640549/301‑1 (MQ=11) ccGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCggagatgtacagaacc > 1:217357/1‑286 (MQ=255) gaaggACGGCTACAAC‑AACGGTGCGACCG‑GCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCg < 1:72580/297‑1 (MQ=255) aCGTCTACAAC‑AACGGATCGCACG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACACCGAAACCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGAGGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGGAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCAAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGa < 1:242126/301‑1 (MQ=11) tCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGt > 1:650571/1‑301 (MQ=35) aac‑aacGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGGGAACGCCACTGGCGGCA‑ATTT‑‑CGAACAGCTGACCCCGAATCCGACGCAGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCAGGCAAGACCCAGGGCAGCGTCGATTTCCAGAACCAGGCAAATGACGTCTaca > 2:776482/1‑301 (MQ=11) ggacgttgagACCG‑TAAGCG‑‑‑TG‑ACCATCGGGACCGCCACCGGCGGCA‑ACTA‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGGCCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTacaac < 1:213511/292‑1 (MQ=11) gACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCTGCA‑ATTT‑‑CGAGCAGCTGACCCCGAAGCCGACCCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCg < 1:712216/301‑1 (MQ=255) ccacggcgctcgtccaacATCGAGAGCGCAACGGGCGGCA‑AATT‑‑CGAACAACTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGtt < 2:723220/284‑1 (MQ=11) cAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAGCAGCTGACCCCGAACCCGACCCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTc < 1:776753/301‑1 (MQ=255) ggCG‑‑‑TC‑ACCATCGATAACGCCACAGGCGGTA‑ACTT‑‑CGAACAGCTGACTCCGAATCCGACGCTGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCAGCACCGCGACCCTGACGGCGAGCCCTTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCa < 1:60220/300‑1 (MQ=11) g‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCTGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCACGGCAGCGTCGATTTCCAGACCCCGGCGAATGCCGTCTACAACAACTGCTCCACCGTCc‑gcg > 2:650953/1‑301 (MQ=255) aCCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGACCGTCGGTCACCGAAGGCGGCGTGACCACCTACACCGTGACCCTGAGC‑AATCCTGCTCCGACGCCGGTAACAGTGACCCTGTTCAACGGCCAAAACATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCAAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCA‑GCGTCa > 1:104682/1‑301 (MQ=11) gaccGCCCCTGGCGGCA‑ACTT‑‑CCAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGATCCCGTCGGTCACCGCAGCCTACGTGATCACCTCCACCGTCACCCTGACC‑AATCCGGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCA‑GCGTCACCATCgag < 1:791542/298‑1 (MQ=11) gactgcagttcagacgtgtgatcttcTGAGCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGACGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCA‑GCGTCACCATCGAGAAc < 1:324578/276‑1 (MQ=11) ggtgcA‑ACTA‑‑CGAACACCTGACCCCGGATCCGACGCCGG‑CGCAGACGACGACCAAGGACTCGGTCGATGCCACGAGCGCGACCCTGACGGCTAGCCCGGCGGACACCGAAGGCGGCGTGATCACCTTCTCCGAGACCGAGAGCGCATGC‑GCGCAGACGCCGGTGCCAGTGACCCTGTCCGGGTGCTAAACCGATACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCA‑GCGTCACCATCGGGAACGCCACAgg < 1:616314/298‑1 (MQ=2) gcA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCA‑GCGTCACCATCGAGAACGCCACAGGCgg > 1:240281/1‑301 (MQ=35) a‑aCTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCCATTTCCAGACCCCGGCGAATGACGCCTACAACAAGGGTTCGACC‑TGACGCGTCCACACCCAGAACGCCACAGGCGGTa > 1:533215/1‑301 (MQ=11) attt‑‑CGAGCAACTGACCCCGAACCCGACCCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGAACCTGTACAACGGTCAAATCAATACCGTTGAAGCAGGCAAGACCCCGGGCAGCGTCGAGTTCCAGAAAACGGCGAATGACGTCTACAACAACGGTTCGACCGTCA‑GCGTAGCCATCGAGAACGCCACAGGCGGTaa > 1:831500/3‑301 (MQ=11) tt‑‑CGAGCAACTGACCCCGCACCCGGCGCCGG‑CGCAGACCACGATCAACGACTCGGTCGACGCCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCA‑GCGTCACCATCGAGAACGCCACAGGCGGTAAtt < 1:371302/301‑1 (MQ=255) tt‑‑CGAGCAACTGACCCAGAACCCGACCCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCA‑GCGTCACCATCGAGAACGCCACAGGCGGTAAtt < 2:113725/301‑1 (MQ=9) t‑‑CGAACAGCTGACCCCAAACCCGACGCCGG‑CTCCGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCA‑GCGTCACCATCGAGAACGCCACAGGCGGTAAttt < 1:359821/301‑1 (MQ=25) tcagacgtgtgctctgccgagcggaggCCGG‑CTCAGACCACGATCAACGACTCGGTCGAAACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCA‑GCGTCACCATCGAGAACGCCACAGGCGGTAAtt < 1:352155/275‑1 (MQ=11) tcacagcaaccgACCCCGAACCCGACGCCGG‑CCCAGACCACGACCAACGACTCGGTCCAAACCCCTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTCCACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCAAACGGCAAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCCTCGAGTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCA‑GCGTCACCATCGAGAACGCCACAGGCGGTAAtt < 1:809482/290‑1 (MQ=11) gAACAGCTGGCCCCTGACCCGACGCCGG‑CTCAGACCACGCTCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAATCATTACCGTTGAAGCCGGCAACAACAACGGCAGCGTCGATCTACAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCA‑GCGTCACCATCGAGAACGCCACAGGCGGTAATTTCg < 2:650341/301‑1 (MQ=11) gAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCA‑GCGTCACCATCGAGAACGCCACAGGCGGTAATTTCg < 1:651183/301‑1 (MQ=35) gcaacTGACCCCGAACCCGACCCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCA‑GCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAg < 1:305262/297‑1 (MQ=21) aGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACCACACCAACGACGGTTCGACCCTCA‑GCGTCACCATCTAGAACGCCACCTGCGCTAATTTCGAGCa > 1:483853/1‑301 (MQ=11) cTGACCCCGAACCCGACCCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCA‑GCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAAc < 1:160039/301‑1 (MQ=25) cTGACCCCGAACCCGACCCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTAAAGCCGGCAAGACCCAGTGCAGCGTCGAATTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCA‑GCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAAc > 1:821644/1‑301 (MQ=255) tgccccccaaaccGACCCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCA‑GCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACt < 1:840531/290‑1 (MQ=255) ccccGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGCCGTCTACAACAACGGTTCGACCGTCA‑GCGTCACCATCGAGAACTCCACAGACggcaacttgcagaaaccgaa > 1:318255/1‑283 (MQ=255) ccgacgccGACCCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACGTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCA‑GCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGAccc < 1:628600/295‑1 (MQ=255) ccGACCCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGGGACCCTGACGGCGAGGCCGTCGCTCCCCTCACGCGGCGTAATCACCTACACCGTGTCCCTGAGC‑AATCCTGCCCAGACGCCGGTAACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGCCCCCGGCGAATGACGTCTACCACAACGGTTCGACCGTCA‑GCGTCACCATCGAGAACGCCACCGGCGGCAATTTCGAACAACTGACCCCGAATc > 1:328795/1‑301 (MQ=11) gCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCAACGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGCCA‑GCGTCACCATCGAGAACGCCACATGCGGCAATTTCGACCAACCAACCCCGAATCCGAcc > 2:12038/1‑301 (MQ=255) gCCGG‑CTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCA‑GCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGAcc > 1:762063/1‑301 (MQ=2) | GGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGA‑ATGACGTCTACAAC‑AACGGTTCGACCG‑TCAGCG‑‑‑TC‑ACCATCGAGAACGCCACTGGCGGCA‑ACTT‑‑CGAACAGCTGACCCCGAACCCGACGCCGG‑CTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGC‑AATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCA‑GCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACC > AE015451/196498‑197095 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |