| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AE015451 | 499,203 | A→G | intergenic (+47/‑249) | uhpA → / → PP_0411 | DNA‑binding response regulator UhpA/Polyamine ABC transporter, ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 499,203 | 0 | A | G | 97.6% | 137.0 / NA | 41 | intergenic (+47/‑249) | uhpA/PP_0411 | DNA‑binding response regulator UhpA/Polyamine ABC transporter, ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (17/23); minor base C (0/1); total (17/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGGCCGACCGCATGGTGTTCGAAGTAGGCCTCACCGAATCCCGGCCGTTGCACACACTGCTCTCGGAGCGGGAATTTTCGGTGTTCGAGCGCCTGGCCCAGGGCGCCAACGTCAACGACATCGCCCAGCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAA‑GGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCAGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGCAGTCATCCAACAAGAAGGTGCAGGCATGAGCGAGGCGAAGTCGAACGCTGCAACCGGCGAAACG > AE015451/498912‑499490 | tgtccGACCGCATGGTGTTCGAAGTAAGCTCCACCGAATCCCGGCCGTTGCACACACTGCTCTCGGAGCGGGAATTTTCGGTGTTCGAGCGCCTGGCCCAGGGCGCCAACGTCAACGACATCGCCCAGCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAA‑GGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGccc < 2:22677/298‑1 (MQ=255) cATGGTGTTCGAAGTAGGCCTCACCGAATCCCGGCCGTTGCACACACTGCTCTCGGAGCGGGAATTTTCGGTGTTCGAGCGCCTGGCCCAGGGCGCCAACGTCAACGACAACGCCCAGCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAA‑GGCACGCCTGATGCAGAAGATGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGggc > 1:263720/1‑301 (MQ=255) gAAGTAGGCCTCACCGAATCCCGGCCGTTGCACACACTGCTCTCGGAGCGGGAATTTTCGGTGTTCGAGCGCCTGGCCCAGGGCGCCAACGTCAACGACATCGCCCAGCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAA‑GGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCctgct < 1:55149/301‑1 (MQ=255) tcTCACCGCATCCCGGCCGTTGCACACACTGCTCTCGGAGCGGGAATTGTCGGTGTTCGAGCGCCTGGCCCAGGGCGCCAACGTCAACGACATCGCCCAGCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAA‑GGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTa < 1:350648/300‑1 (MQ=255) cTCACCGAATCCCGGCCGTTGCACACACTGCTCTCGGAGCGGGAATTTTCGGTGTTCGAGCGCCTGGCCCAGGGCGCCAACGTCAACGACATCGCCCAGCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAA‑GGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATAAGGGTGACCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCGGGACTGCTGATCTCTaa > 2:350535/1‑300 (MQ=255) tCACCGAATCCCGGCCGTTGCACACACTGCTCTCGGAGCGGGAATTTTCGGTGTTCGAGCGCCTGGCCCAGGGCGCCAACGTCAACGACATCGCCCAGCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAA‑GGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATg < 1:379905/301‑1 (MQ=255) aaTCCCGTCCGTTGCACACACTGCTCTCGGAGCGGGAAGTTTCGGTGTTCGAGCGCCTGGCCCAGGGCGCCAACGTCAACGACATCGCCCAGCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAA‑GGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAg < 2:690782/301‑1 (MQ=255) aaTCCCGGCCGTTGCACACACTGCTCTCGGAGCGGTAATTTTCGGTGTTCGAGGGCCTGGCCCAGGGCGCCAACGTCAACGACATCGCCCAGCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAA‑GGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAg < 1:725355/301‑1 (MQ=255) ccacTGCGCGCGGAGCGGGAATTTGCGGTGTTCTGGCGCCTGGCCCAGGGCCCCAACGTCAACGACAACGCCCCGCAGTTGGCGCTGTCGAGCAAGAACATCAGCACCCACAA‑GGCACGCATGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATTGCTGAGCCGGCCTCTTCGCGGGc < 2:263630/300‑1 (MQ=255) cgtgcgtcaggAGCGGGACGTTCCGGTGTTCGACGGCCTTGCCAAGGGCGCCAACGTCAACGACATCGCCCAGCCGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAA‑GGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCAt < 2:782973/292‑1 (MQ=255) ctcGGAGCGGGAATTTTCGGTGTTCGAGCGCCTGGCCCAGGGCGCCAACGTCAACGACATCGCCCAGCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAA‑GGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGc > 2:214546/1‑301 (MQ=255) gtgttgtaccgcCTGGCCCAGGGCGCCAACGTCACCGCCATCGCCCAGCAGTTGGCGCTGGCGAGCAAGACCATCAGCACCCACAA‑GGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGtt < 2:91667/292‑1 (MQ=255) gcCTGGCCCAGGGCGCCAACGTCAACGACATCGCCTATCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAA‑GGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGCAACTTGCCGAAGCCTATGTGGGAGCGGTCATGCCCGCGAACGGGCCTGGCGTGCTCATCTCTATGGCTGAGCCGGCCTCTTCGCGGGTCTGCCCGCccccctcggtgcattggttggcgcccacg > 2:746765/1‑276 (MQ=255) cTGGCCCAGGGCGCCAACGTCAACGACATCGCCCAGCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAA‑GGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAggg > 1:192978/1‑301 (MQ=255) aagccAACGACATCGCGCAGCAGTTGGCGCGGTAGAGCAAGACCATCAGCACCC‑CAAGGGCACGCCTGATGAAGAAATAGAAGGTGAACTCGCTGGCGGAGCTGGTGAAGTCCGCCATGGAGCCTAAGCTGATCTAATTGAGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGGGCGGGCAAGCCCGCGAACGGGCCTGGCCTGCTGACCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCa < 2:760685/297‑1 (MQ=255) tCAACGACATCGCCCAGCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAA‑GGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGACATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATcc < 1:546779/301‑1 (MQ=255) atcggcaagcagTGGGCGCTGTCGAGGAAGACCATGCGCACGCAGAA‑GGGACGCCGGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTAGGCCATGGAGCACAAGCTGATCTGATTGCTACATACGGGTGCGCGAAACATGCCGAAGCCTATGAGGGAGCGGGCATGCCCGAGAACGGGCCTGGCCTGCTGATCTCTATGGGTGAGCCGGCCTCTTCGGGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAggg < 1:520549/294‑1 (MQ=255) ccGCCCAGCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAA‑GGCACGCCGGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCCCAAGCTGATCTGATTGCGAAATACGGGTGCCCGAAGCTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGc < 1:378881/300‑1 (MQ=255) aGCAAGACCATCAGCACCCACAA‑GGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCAt < 1:188352/301‑1 (MQ=255) aCCATCAGCACCCACAA‑GGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATTCGgat > 1:636077/1‑301 (MQ=255) aacAGCACCCACAA‑GGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGAGCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGgatgat < 2:192909/299‑1 (MQ=255) aGCACCCACAA‑GGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCACCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGgatgattgg > 2:145558/1‑298 (MQ=255) ccACAA‑GGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATtct > 1:547184/1‑301 (MQ=255) caA‑GTCACGCCTGATGACGAAGTTGAAAGTGAATTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACATGCTGATCTGATTGGGACATACGGGTGCCCGACACTTGCCGAAGCCTATGTTGGAGCGGTCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATtctctc < 1:747024/301‑1 (MQ=255) gAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCgg < 1:806363/301‑1 (MQ=255) aaatggAACTCGCTGGCGGAGCTGTGGAAGTCCGGCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGGCCGAAACTTGCCGAAGCCGATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTg < 2:661172/296‑1 (MQ=255) aaaGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCCTCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCttt > 1:296782/1‑300 (MQ=255) cctcgcggtgggAGCTGGTGAAGTACGCCATGGAGCACAAGATGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGCGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTctct < 1:797522/291‑1 (MQ=255) tGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCAATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCTCTTGCGTTtcttttatt > 1:211177/1‑296 (MQ=255) ggCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTActc > 1:673913/1‑301 (MQ=255) caatggagagcaAGCTGTACTGATGGAGACACACGGGTGCAGGAAACTTGCCGAAGCCTAGGTGGGAGCGGGCATGCCGGCGACCGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGCAGTCATcc < 1:23364/291‑1 (MQ=255) agcaatagctgagatgatTGCGAAATACGGGGGCCCGAAACTTGCCGAAGCCTAGGGGGGAGCGGGCATGCCCGGGAACGGGCCTGGCCTGCTGATCTCTATGGCTGGGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGCAGTCATCCAACaag < 2:635854/287‑1 (MQ=255) tctgcggtgatGGCGACATGCGGGTGCCCGAAACTGGGCGAAGCGTATGTTGGAGACGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGGTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGCAGTCATCCAACAAGAAGGTGc < 2:245563/294‑1 (MQ=255) ctgatgtgatTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTACTGATCTCTCTGGCTTAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCTTGGTTGGCTCGCAAGGGCCTTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCTTCTCTTCTCCTCTTTTGCCTCCGCATTCATCCAACAAGCAGGTGcc > 1:245650/1‑300 (MQ=255) agatcagaaggagaaaaaCGGGGGCGCGAAACTAGCCGAAGGCTATGTGAGAGCGGGAAGGACAGCGAACGGGCCTGGACGGCTGAGCGCTACGGCTGATCCGGCCTGTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCGTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGCAGTCATCCAACAAGAAGGTGCAg < 2:788616/284‑1 (MQ=255) ctgatTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGTTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGTGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGCAGTCATCCTACCAGAAGGTGCAGGCAt > 1:308300/1‑301 (MQ=255) ctgatTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGCAGTCATCCAACAAGAAGGTGCAGGCAt < 1:145609/301‑1 (MQ=255) tgatTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCCCGCAAGGGCATTCCAATCCCGCCATTCTTGTAGGGCGAACCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGCTTTTCGGGCGCTTGCGTCTCTTCTACCCTTTTGTCTACTCAGTCATCCAACAAGAGAGTGCAGGCATg > 1:534776/1‑301 (MQ=255) tGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCCGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGCAGTCATCCAACAAGAAGGTGCAGGCAttcgcg > 2:630933/1‑296 (MQ=255) ccTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCTCTTGCGTCTCTTCTACTCTTTTGCCTACGCAGTCATCCAACAAGAAGGAGCAGGCATGAGCGAGGCGAAGTCGAACGCTGCAACCGGCGAAACg > 2:243447/1‑301 (MQ=255) ccTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGCAGTCATCCAACAAGAAGGTGCAGGCATGAGCGAGGCGAAGTCGAACGCTGCAACCGGCGAAACg > 1:407584/1‑301 (MQ=255) | TGGCCGACCGCATGGTGTTCGAAGTAGGCCTCACCGAATCCCGGCCGTTGCACACACTGCTCTCGGAGCGGGAATTTTCGGTGTTCGAGCGCCTGGCCCAGGGCGCCAACGTCAACGACATCGCCCAGCAGTTGGCGCTGTCGAGCAAGACCATCAGCACCCACAA‑GGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCAGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGCAGTCATCCAACAAGAAGGTGCAGGCATGAGCGAGGCGAAGTCGAACGCTGCAACCGGCGAAACG > AE015451/498912‑499490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |