New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 5988787 =0 (0.000)47 (0.760) 44/586 0.3 100% intergenic (+81/‑465) kefB‑III/PP_mr64 glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
?AE015451 6037870 = NA (NA)intergenic (+72/+145) argB/PP_5290 Acetylglutamate kinase/transposase

GGACCCAGCTGAGAATTAGACGATTTGTGATGGTTTTTGTGAGTTCGCGTCATGGCGGCGAGGTGATCGTCAGGAAATTGCAGGATGGCTTCCAGGTGCCTGGCGATAGTTTTTGGGCGCCCATGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/5989093‑5988787
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGAAGGCCAGCCGAGCCAAGCGACGTGCAAGGATCACCAAGGCTTGAGTGGTTTTCTTCCCCCGGGCTTGGTG  >  AE015451/6037870‑6038155
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
GGACCCAGCTGAGAATTAGACTATTTGGGATGGTTTTTGTGAGTTCGCGTCATGGCGGCGAGGTGATCGTCAGGAAATTGCAGGATGGCTTCCAGGTGCCTGGCGATAGTTTTTGGGCGCCCATGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACG                                                                                                                                                                                                                                                                                                      <  2:196792/301‑1
 GACCCAGCTTAGAATTGGACGATTTGTGATGGTTTTTTGGAGTTCGCGTCATGGCGGCGAGGTGATCGTCAGGAAAGTGCAGGATGGCTTCCAGGTGCGTGGCGATAGTTTTTGGGCGCCCATGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGT                                                                                                                                                                                                                                                                                                     <  1:356527/301‑1
 GACCCAGCTGAGAATTAGACGATTTGTGATGGTTTTTGTGAGTTCGCGTCATGGCGGCGAGGTGATCGTCAGGAAATTGCAGGATGGCTTCCAGGTGCCTGGCGATAGTTTTTGGGCGCCCATGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTTCGCCAGTGGGCTCGCGTGCCCGTCCCACCGGGATAACTTGCCCGAAACAAACGa                                                                                                                                                                                                                                                                                                     >  1:442266/1‑300
    cagGCTGAGAATTAGACGATTTGGGATGGTTTTTGTGCGTTCGCGTCATGGCGGCGAGGTGATCGTCAGGAAATTGCAGGATGGCTTCCAGGTGCCTGGCGATAGTTTTTGGGCGCCCATGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGG                                                                                                                                                                                                                                                                                                  <  2:618488/298‑1
              ATTAGACGATTTGTGATGGTTTTTGTGAGTTCGCGTCATGGCGGCGAGGTGATCGTCAGGAAATTGCAGGATGGCTTCCAGGTGCCTGGCGATAGTTTTTGGGCGCCCATGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCCCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCTCGCGACCGCCTTGTTTGTACGACCCGATATCGAGGCGTTCGACAGGGGGCCCGGGTGCCCGTCCCACAGGCATAACTGGCCCGCAAGAACCGTAGGAGCTTCTctt                                                                                                                                                                                                                                                                                        >  2:719246/1‑298
                                     TGTGAGTTCGCGTCATGGCGGCGAGGTGATCGTCAGGAAATTGCAGGATGGCTTCCAGGTGCCTGGCGATAGTTTTTGGGCGCCCATGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAACCAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAA                                                                                                                                                                                                                                                                 >  2:414373/1‑301
                                      GTGAGTTCGGGTAATGGCGGCGAGGTGATCGTCAGGAAATTGCAGGATGGCTTCCAGGGGCCTGGCGATAGTTTTTGGGCGCCCATGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAG‑‑GCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAAC                                                                                                                                                                                                                                                              <  2:206738/301‑1
                                             CGCGTCATGGCGGCGAGGTGATCGTCAGGAAATTGCAGGATGGCTTCCAGGTGCCTGGCGATAGTTTTTGGGCGCCCATGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCAT                                                                                                                                                                                                                                                         >  1:351583/1‑301
                                                GTCATGGCGGCGAGGTGATCGTCAGGAAATTGCAGGATGGCTTCCAGGTGCCTGGCGATAGTTTTTGGGCGCCCATGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGG                                                                                                                                                                                                                                                      <  1:414538/301‑1
                                                            AGGTGATCGTCAGGAAATTGCAGGATGGCTTCCAGGTGCCTGGCGATAGTTTTTGGGCGCCCATGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCA                                                                                                                                                                                                                                          >  2:110881/1‑301
                                                               aGATCGTCAGGCAATTGAAGGATGGCTTCCAGGTGACTGGCGATAGTTTTTGGCGGCACAGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGATCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACC                                                                                                                                                                                                                                       <  1:282905/300‑1
                                                               TGATCGTCAGGAAATTGCAGGATGGCTTCCAGGTGCCTGGCGATAGTTTTTGGGCGCCCATGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAAAGTAGGATATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACC                                                                                                                                                                                                                                       >  2:137399/1‑301
                                                                             TTGCAGGATGGCTTCCAGGTGCCTGGCGATAGTTTTTGGGCGCCCATGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGGAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTC                                                                                                                                                                                                                         >  2:315675/1‑301
                                                                              gggagaatggatgccggggGCCTGGCGATAGTTTTTGGGGGCCCATGGGATGGAGCGCCGCCCGGGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTGCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCA                                                                                                                                                                                                                        <  1:151158/282‑1
                                                                                 AGGATGGCTTCCAGGTGCCTGGCGATAGTTTTTGGGCGCCCATGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGGAAAAACGCCATCGGCCTCTCTCAGCAACCGCGAGGTACGAATCAGCG                                                                                                                                                                                                                     >  1:422532/1‑301
                                                                                   GATGGCTTCAAGGGGCCTGGCGATAGTTTTTGGGCGCCCATGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTG                                                                                                                                                                                                                   <  2:351448/301‑1
                                                                                                  CCTGGCGAGAGTTTTTGGGCGCCCATGAGACCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCC                                                                                                                                                                                                    <  1:248704/301‑1
                                                                                                    gGGCGATAGTGTTTGGGCGGCCATGAGATCGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGGGCGACCGGCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTGTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCC                                                                                                                                                                                                  <  1:641911/300‑1
                                                                                                      GCGATAGTGTGTGGGCGCCCATGAGAGCGAGCGACGCCCGCGCGGCGCTTCGCGGGTAAGCCCGCTCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCGTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAG                                                                                                                                                                                                <  1:368809/301‑1
                                                                                                               ttggggagccccggagttcggGCGCCGCCGCGGCGGGGCTTCGCGAGTAACCCCGCTCCTGCGTTTGTTTCTGTCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTGGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATA                                                                                                                                                                                       <  2:306269/280‑1
                                                                                                                  GGGCGCCCATGAGTTCGGGCGCCGGCCGCGCGGCGCTTCGCGGGTAAACCCGATACTACGTTTGTTTCTGGCCAAGCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTG                                                                                                                                                                                    <  1:579076/301‑1
                                                                                                                       ccaatggtgccggGCGCCGCCCCCGCAGCGCTTTACGGGTAAACCCCTTCTACCGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGT                                                                                                                                                                               <  2:181226/288‑1
                                                                                                                        ccatgcgatcagtCGCCGCCCGCGCGTCGCTTCGCGGGTAAACCCGCTCCTGCGTTTGTTTCTGGCCAAGCCCGCCTGGGCCAGGCGCGCGCGAACGCCTTGTTTGTACGAAGCGATATCGAGGCGTGGGCCAGGGGGCTCGCGTGCGCGTCACACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCGCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTC                                                                                                                                                                              <  1:319988/288‑1
                                                                                                                         aATGAGACCGAGCGCCGCCCGCGCGGCGCTCCGCGAGTAAACCCGTTCCTACGGTGGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGGGAATTTCTCCCCAGCATTGGATACTGCCCGTCA                                                                                                                                                                             <  1:261105/300‑1
                                                                                                                             aggTCGAGCGCCGCCCTCGGGGCGCTTCTCGGGTAAACCCGCTCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCGGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCAAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTT                                                                                                                                                                         <  2:189876/298‑1
                                                                                                                                            ccgatctGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTT                                                                                                                                                           <  1:381637/294‑1
                                                                                                                                                cccccccctcttccgctctccccgtcccttCGTTTGTTTCTGGCCACTCCCTCCTGTCCCAGTCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCA                                                                                                                                                        <  2:323626/271‑1
                                                                                                                                                   GCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATGTCGCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCGGCGTTagatcgg                                                                                                                                                    >  2:381489/1‑294
                                                                                                                                                              gtaatccaGCTCCTACGTTTGTTTCTGGCCAATCCCGCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCT                                                                                                                                         <  1:410140/293‑1
                                                                                                                                                               TAAACCCGCTCCTACGTTTGTTTCTGGCCAATCCCGCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAAATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTG                                                                                                                                        <  1:584925/301‑1
                                                                                                                                                                  cccctCTCCTACGTTTGTTTCGGGACAAGCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCC                                                                                                                                     <  1:273984/296‑1
                                                                                                                                                                  ACCCGCTCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAagatcggaagaggacacgg                                                                                                                                     >  1:323753/1‑282
                                                                                                                                                                   CCCGCTCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGACTTTCTCCCCAGCATTGGATACTTCCCGTCAGTTTGGGCGGGCTGCGTTGCCGCCCCAGCCTCAGCTGGCCG                                                                                                                                    >  2:148547/1‑301
                                                                                                                                                                           TACGTTTGTTGCTGGCCAACCCCTCCTGTGCCCGGCGCGGGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGGGCCAGGGGGCTGGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGGGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCA                                                                                                                            <  1:533350/301‑1
                                                                                                                                                                               GTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGCATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCACCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGACGGCTGGGCACCc                                                                                                                         >  1:576888/1‑300
                                                                                                                                                                                        gGGCCAATCCTCCCTGTGCCGGGCGGGCGGGACCGCCTTGTTTGTACGAGCGGATATCGAGTCGTGAGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATAT                                                                                                                <  2:631022/300‑1
                                                                                                                                                                                         GGCCAATCCCTCCTGTGGCAGTGGCGCGCGACCGCCTTGTGTGTACGAGGCGATATCGAGGCGGGCGACAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATA                                                                                                               <  2:283404/301‑1
                                                                                                                                                                                              cTCCCTCCTTGGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCG                                                                                                          <  1:356248/300‑1
                                                                                                                                                                                                     ttcgGCCAGGCGGACGCGTCCGCCTTGTTTGTCCGCCGCGTTATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACCGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCC                                                                                                   <  2:422367/297‑1
                                                                                                                                                                                                          CCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGacttcagtcg                                                                                              >  1:557887/1‑291
                                                                                                                                                                                                          CCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCG                                                                                              >  1:216975/1‑301
                                                                                                                                                                                                                         CGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCAAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATTTACCGGGCTTCCAGTCGGCCGGTTGCCTtacc                                                                               >  2:539082/1‑297
                                                                                                                                                                                                                              TGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCC                                                                          <  1:96743/301‑1
                                                                                                                                                                                                                                     agGACGCCATATCGAGGCGTGCGCCAGGGGGCTGGCGTGCGCGTCCCACAGGAATAACTGGCCCAACACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAACAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGAAGGCC                                                                   <  1:284591/299‑1
                                                                                                                                                                                                                                       GACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGTGCTGCGTTGCAGCCGCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTACAGTCGGCCTGATGCCTCATAAGGCCGAGGGCCAc                                                                 >  1:439241/1‑300
                                                                                                                                                                                                                                               TATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGAAGGCCAGCCGAGCC                                                          >  1:622911/1‑301
                                                                                                                                                                                                                                                      GCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGAAGGCCAGCCGAGCCAAGCGAC                                                   <  1:110929/301‑1
                                                                                                                                                                                                                                                                 gggggtcgcgggagcggccaaaAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGAAGGCCAGCCGAGCCAAGCGACGTGCAAGGATC                                        <  2:216890/279‑1
                                                                                                                                                                                                                                                                                  CCCACAGGAATAACTGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGAAGGCCAGCCGAGCCAAGCGACGTGCAAGGATCACCAAGGCTTGAGTGGT                       <  1:539312/301‑1
                                                                                                                                                                                                                                                                                                gGGCCCGAAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGATGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGAAGGCCAGCCGAGCCAAGCGACGTGCAAGGATCACCAAGGCTTGAGTGGTTTTCTTCCCCCGGG         <  1:285663/300‑1
                                                                                                                                                                                                                                                                                                       AAACAAACGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGAAGGCCAGCCGAGCCAAGCGACGTGCAAGGATCACCAAGGCTTGAGTGGGTTTCTTCCCCCGGGCTTGGTG  >  1:40594/1‑301
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
GGACCCAGCTGAGAATTAGACGATTTGTGATGGTTTTTGTGAGTTCGCGTCATGGCGGCGAGGTGATCGTCAGGAAATTGCAGGATGGCTTCCAGGTGCCTGGCGATAGTTTTTGGGCGCCCATGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGGCGTGCGCCAGGGGGCTCGCGTGCGCGTCCCACAGGAATAACTGGCCCGAAACAAACGTAGGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/5989093‑5988787
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGAAGGCCAGCCGAGCCAAGCGACGTGCAAGGATCACCAAGGCTTGAGTGGTTTTCTTCCCCCGGGCTTGGTG  >  AE015451/6037870‑6038155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.