Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AE015451 | 1,124,571 | 0 | T | A | 41.7% | 29.2 / 21.8 | 37 | Y191F (TAC→TTC) | gcvT‑I | aminomethyltransferase |
Reads supporting (aligned to +/- strand): ref base T (15/6); new base A (15/0); total (30/7) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.04e-02 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.53e-01 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
TCGCCTCGGCACCCGGGAAGCCGGCAGCACGT‑GCACCGTCGGCACGGCGCACCTTGGAAATTGCCCACAGCAGGCTGGCTTCGATCGGCGTAGTCTCGCTGTTCATGTCGTGGCCATACAGGCACAGGCCAGCTTCCAGGCGCAGCGAGTCGCGTGCGCCCAAGCCGATCGGCTGTACTTCCGGCTCGGCCATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTA‑G‑CCGTCTTCGCCGGTGTAGCCCGAGCGGCTGACGAAGCAGTCCACACCCAGCAGTTTTACCCGGCGGAACTGCATGAAGGTCATGCCGGCCACTTCTGGAGCCAGGCGTTCCAGCACCTTGACTGCAGCCGGGCCTTGCAGGGCGAGCAGGGCACGCTCCTCGAACAGCGGCTGCACCTCGCAACGGCTGCCGATGTGGGTTTGCAGGTGAGCCAGGTCCTGCTCCTTGCAGGCGGCGTTGACGACCAGGAACAGGGTGTCCTCGCCCAGGTTGGCAACCATCAGGTCGTCGAGAATGCCGCCTTGCTCAT > AE015451/1124311‑1124865 | gggCCTCGGCAGCAGGGAAGCCGGCAGCACGTGGCA‑AGTCGACACGGCGAACCTTGGAAAGTGCACACAGAAGGCTGGCGTCGATCGGCGTGGGCTCGCTGTTCATGTCGGGGCCATACAGGCACAGGCCAGCTTCCAGGGGCAGCGAGTCGGGTGCGCCCAAGCCGATCGGCTGTACTTCCGGCTCGGCCATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTA‑G‑CCGTCTTCGCCGGTGGAGCCCGGGCGGCTGACGAAGCAGTCCACACCCAGCAGttt < 2:1047548/299‑1 (MQ=255) ctgccctacgcgattccgatatcGT‑GCCCCGTCGCAACGCCGCACCCTGAAAATTGCACACGGCAGGCGGGCTTCGATCGGGGTAGTCTCGCTGTTCATGTGGTGGCCATACAGGAACAGGCCAGCTTCCAGGCGCAGCGAGTCGCGTGCGCCCAAGCCGATCGGCTGTACTTCCGGCTCGGACATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTA‑G‑CCGTCTTCGCCGGTGTAGCCCGAGCGGCTGACGAAGCAGTCCACACCCAGCAGTTTTACCcgg < 2:1682225/279‑1 (MQ=255) aaGCCGGCAGCACGT‑GCACCGTCGGCACGGCGCACCTTGGAAATTGCCCACAGCAGGCTGGCTTCGATCGGCGTAGTCTCGCTGTTCATGTCGTGGCCATACAGGCACAGGCCAGCTTCCAGGCGCAGCGAGTCGCGTGCGCCCAAGCCGATCGGCTGTACTTCCGGCTCGGCCATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTATG‑CCGTCTTCTGC‑TTGAAAAAAAAGAGGCTGACGAAGCAGTCCACACCAAGCAGTTTTACCCGGCGGAACTGcc > 1:563666/1‑300 (MQ=255) ggCAGCACGT‑GCACCGTCGGCACGGCGCACCTTGGAAATTGCCCACAGCAGGCTGGCTTCGATCGGCGTAGTCTCGCTGTTCATGTCGTGGCCATACAGGCACAGGCCAGCTTCCAGGCGCAGCGAGTCGCGTGCGCCCAAGCCGATCGGCTGTACTTCCGGCTCGGCCATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTATG‑CCGTTTTC‑CGCTTGTAAACCAAACGGCTGACGAACCAGTCCCCACCCAGCACTTTTACCcggcagatcggaagagcc > 1:74774/1‑287 (MQ=255) caCGT‑GCACCGTCGGCACGGCGCACCTTGGAAATTGCCCACAGCAGGCTGGCTTCGATCGGCGTAGTCTCGCTGTTCATGTCGTGGCCATACAGGCACAGGCCAGCTTCCAGGCGCAGCGAGTCGCGTGCGCCCAAGCCGATCGGCTGTACTTCCGGCTCGGCCATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTATG‑CCGTCTTC‑CGCGTGAAAAAAGAACGGCTGACGAAGCAGTCCAACCCCAGCAGTTTTACCCGGCGGAACTGCATGAAGGTCAt > 1:1710226/1‑301 (MQ=255) aCGT‑GCACCGTCGGCACGGCGCACCTTGGAAATTGCCCACAGCAGGCTGGCTTCGATCGGCGTAGTCTCGCTGTTCATGTCGTGGCCATACAGGCACAGGCCAGCTTCCAGGCGCAGCGAGTCGCGTGCGCCCAAGCCGATCGGCTGTACTTCCGGCTCGGCCATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTATG‑CGGTCTTC‑TGGGTGTAACACAAGCGGCTGACCACGCAGTGCACACCCAGCAGTTGTACCCGGCGGagatgcagggaggtcctt > 1:2232397/1‑284 (MQ=255) cGT‑GCACCGTCGGCACGGCGCACCTTGGAAATTGCCCACAGCAGGCTGGCTTCGATCGGCGTAGTCTCGCTGTTCATGTCGTGGCCATACAGGCACAGGCCAGCTTCCAGGCGCAGCGAGTCGCGTGCGCCCAAGCCGATCGGCTGTACTTCCGGCTCGGCCATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTA‑GCCCGTCTTC‑CCGGTGTAACAAGAAAGGCTGACGAAGCAGTCCACACCCAGCAGTTTTACCcggagatcggaagagcacacgtctg > 1:1682879/1‑279 (MQ=255) cACCTTGGAAATTGCCCACAGCAGGCTGGCTTCGATCGGCGTAGTCTCGCTGTTCATGTCGTGGCCATACAGGCACAGGCCAGCTTCCAGGCGCAGCGAGTCGCGTGCGCCCAAGCCGATCGGCTGTACTTCCGGCTCGGCCATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTATG‑CGGTTTTC‑CCCTTGTATACCAAACGGCTGACGAAGCAGTCCACACCGAGCAGTTTTCCCCGGCGGAACTGAATGAAGGTCATGCCGGCCAcagatcggacgcgg > 1:220432/1‑288 (MQ=255) ttGGAAATTGCCCACAGCAGGCTGGCTTCGATCGGCGTAGTCTCGCTGTTCATGTCGTGGCCATACAGGCACAGGCCAGCTTCCAGGCGCAGCGAGTCGCGTGCGCCCAAGCCGATCGGCTGTACTTCCGGCTCGGCCATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTATG‑CCGTCTTCTGC‑TTGAAAAACAAACGGCTGACGAAGCAGTCATCACCCAGCAGGTTTACCTGGCGTAACTGCATGACGGTCATGCCGTCCACTTCTGTAGCCAGGCGtt > 1:479962/1‑301 (MQ=255) ggAAATTGCCCACAGCAGGCTGGCTTCGATCGGCGTAGTCTCGCTGTTCATGTCGTGGCCATACAGGCACAGGCCAGCTTCCAGGCGCAGCGAGTCGCGTGCGCCCAAGCCGATCGGCTGTACTTCCGGCTCGGCCATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTATG‑CCGTCTTCTGC‑TTGAAAAAAAAAAGGCTGACAAAGCACTCCACACCCAGCAGATTTACCCGGCGGAACTGCATGAAGGTCATGACGGGCACTTCTGGAGCCAGGCCTTcc > 1:1434754/1‑301 (MQ=255) aaaTTGCCCACAGCAGGCTGGCTTCGATCGGCGTAGTCTCGCTGTTCATGTCGTGGCCATACAGGCACAGGCCAGCTTCCAGGCGCAGCGAGTCGCGTGCGCCCAAGCCGATCGGCTGTACTTCCGGCTCGGCCATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTATG‑CCGTCTTCTGC‑TTGAAAAAAGAAAAGCAGACGAAGCAGTCCACACCCAGCAGCTTTACCCGGCGGAACTGCATGAAGGGCATGCCGGCCAATTCTGGAGGCAGGCGTTCCaa > 1:986310/1‑300 (MQ=255) acaGCAGGCTGGCTTCGATCGGCGTAGTCTCGCTGTTCATGTCGTGGCCATACAGGCACAGGCCAGCTTCCAGGCGCAGCGAGTCGCGTGCGCCCAAGCCGATCGGCTGTACTTCCGGCTCGGCCATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTATG‑CCGTCTT‑GCGCTTGAAACACAAAAGGCTGACGAAGCAGTCCACACCCAGCAGTTTTACCCGGCGGAACTGCATGACGGTCATGCCGGCCACTTCTGGAGCCAGGCGTTCCAGCACCTTGAc > 1:713133/1‑301 (MQ=255) ttCGATCGGCGTAGTCTCGCTGTTCATGTCGTGGCCATACAGGCACAGGCCAGCTTCCAGGCGCAGCGAGTCGCGTGCGCCCAAGCCGATCGGCTGTACTTCCGGCTCGGCCATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTA‑G‑CCGTCTTCGCCGGTGTAGCCCGAGCGGCTGACTAAGCAGTCCACACCCAGCAGTTTTACCCGGCGAAACTGCCTGAAGTTCATGCCGGCCACTTCTGGAGCCAGGCGTTCCACCACCTTGAATCCATCCGGGccc > 2:55672/1‑300 (MQ=255) gCGTAGTCTCGCTGTTCATGTCGTGGCCATACAGGCACAGGCCAGCTTCCAGGCGCAGCGAGTCGCGTGCGCCCAAGCCGATCGGCTGTACTTCCGGCTCGGCCATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTATG‑CCGTCTTCTGC‑TTGAAAAAAAAAAAGCTGACGAAGCAGTCCACACCCAGCAGTTTTACCCGGCGACACTGCATGAAGGTCATGCCGGCCACTTCTGGAGCCAGGCGTTCCAGCACCTTGACGGCAGCCTGGCCttccacggg > 1:2020489/1‑294 (MQ=255) gCTGTTCATGTCGTGGCCATACAGGCACAGGCCAGCTTCCAGGCGCAGCGAGTCGCGTGCGCCCAAGCCGATCGGCTGTACTTCCGGCTCGGCCATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTATG‑CCGTCTTCTCC‑TTGTAAAACAAAAGGGCGACGAAGCAGTCCACAACCACTCGTTCTACCCGGCGGCACCGCATGAACGTCATGCCTGCCACCTCTTGAGCCAGGCGTTCCAGCCCCTTTACCCCAGCCGCGCCTTGCCCGGCCAGCAggccc > 1:1929962/1‑298 (MQ=255) gTGGCCATACAGGCACAGGCCAGCTTCCAGGCGCAGCGAGTCGCGTGCGCCCAAGCCGATCGGCTGTACTTCCGGCTCGGCCATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTATG‑CCGTCTTCTGC‑TTGAAAAAAAAACGGCTGACGAAGCAGTCCACACCCAGCAGTTTTACCCGGCGGAACTGCATGAAGGTCATGCCGGCCCCTTCTGGAGCCAGGCGTTGCAGCACCTTCACTGCAGCCGGGCCTTGCCGGGCCAGACGTGCACGCTCCTCCAAc > 1:108204/1‑301 (MQ=255) ggCCATACAGGCACAGGAGCGCTTCCATGCTCATCGAGGCGCGTGCTCACAAGACTATCGGCTGTACTTCCTGCTCGGGCATCAGGCTGAGGGCCAAGGCGTCGGCTGCGTTGACCGGTACGGAGCTCTCGTA‑G‑CCGTCTTCGCCGGTGTAGCCCGAGCGGCTGACGAAGCAGTCCACACCCAGCAGTTTTACCCGGCGGAACTGCATGAAGGTCATGCCGGCCACTTCTGGAGCCAGGCGTTCCAGCACCTTGACTGCAGCCGGGCCTTGCAGGGCGAGCAGGGCACGCTCCTCGAACAg < 2:108191/301‑1 (MQ=255) cgTGCGCCCAAGCCGATCGGCTGTACTTCCGGCTCGGCCATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTATG‑CCGTCTTC‑CGCTTGAAAAAAAAAAGGCTTACGAAGCATTCCACTCCCATCCTGTTTACCCGTCGGAACTGCACGCAGGTTATGCCGGCTACTTCGCAAGCCAGGCGTTCCAGCACCTTGCCTGCAGCCGTGCCTCGCAGGCCGACAACGTCACGCTCCTCGACCAGCGGCTGCACCTCGTAAccctcccccagttcggttttcactt > 1:1944139/1‑277 (MQ=255) gcCCAAGCCGATCGGCTGTACTTCCGGCTCGGCCATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTATG‑CCGTCTTCTGC‑TTGAAAAAAAAAAAGCTGACGAAGCAGTCCCCACCCAGCCGTTTTACCCGGCGGAACTTCATGAAGGTCATGCCTGCCACTTCTTGAGCCAGGCGTTCCAGCACCTTGACTGCAGCCGGGCCTTGCAGGGCTAGCAGGGCACGCTCCTCGAACAGCTGCTGCACCTCGCACCGGCTGCCGCTGTggtgttgccggttagcc > 1:1709133/1‑286 (MQ=255) cctcttccgctctcccacatgcggcgGGACCAGGCGTCGGGAGCGTTGACCGGTACCGAGATTTCGTA‑G‑CCGTCTGCTGCAGTGTAGCCCGAGCGTCTGACGAAGCAGTCCAACCCCATCAGTTTTGCCCGGAGGAACTGCATGAAGGTCATGCCGGCCACTTCTGGAGCCAGGCGTTCCAGCACCTTGACTGCAGCCGGGCATTGCAGGGCGAGCAGGGCACGCTCCTCGAACAGCGGCTGCACCTCGCAACGGCTGCCGATGTGGGTTTGCAGGTGAGCCAGGTCCTGCTCCTTGCAgg < 2:1522301/281‑1 (MQ=255) aCTTCCGGCTCGGCCATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTATG‑CCGTCTTCTGC‑TTGAAAAAAAAAAGGCTGACGAAGCCGTCCACACCCAGCAGTTTTACCCGGCGGAACTGCATGAAGGTCATGCCGTCCACTTCTGTAGCCAGGCGTTCCAGCACCTTGACTGCATCCGGGCCTTGCAGGGCGAGCAGGGCACGCTCCTCGAACAGCGGCTGCACCTCGCCACGGCGGCCGATGTGGTTTTGCAGGTGAGCCCGGTCCCGCTCCTTGCAgg > 1:1242418/1‑301 (MQ=255) tCCGGCTCGGCCATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTA‑G‑CCGTCTTCGCCGGTGTAGCCCGAGCGGCTGACGAAGCAGTCCACACCCAGCAGTTTTACCCGGCGGAACTGCATGAAGGTCATGCCGGCCACTTCTGGAGCCAGGCGTTCCAGCACCTTGACTGCAGCCGGGCCTTGCAGGGCGAGCAGGGCACGCTCCTCGAACAGCGGCTGCACCTCGCAACGGCTGCCGATGTGGGTTTGCAGGTGAGCCAGGTCCTGCTCCTTTGAggcgg > 2:2264450/1‑301 (MQ=255) ccATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTATG‑CCGTCTTCTGC‑GTGAAAAAAGAACGGCTGACGAAGCAGTCCACACCCAGCAGTTTTACCCGGCGGAACTGCATGAAGGTCATGCCGGCCACTTCTGGAGCCAGGCGTTCCAGCACCTTGACTGCAGCCGGGCCTTGCAGGGCGAGCAGGGCACGCTCCTCGAACAGCGGCTGCACCTCGCAACGGCTGCCGATGTGGGGTTGCAGGTGAGCCAGGTCCTGCTCCTTGCAggagatcggaagaga > 1:1522890/1‑288 (MQ=255) cATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTATG‑CCGTCTTCTGC‑TTGTAAAACAAACGGCTGACGAAGCAGTCCACACCCAGCAGTTTTACCCGGCGGAACTGCATGAAGGTCATGCCGGCCACTTCTGGAGCCAGGCGTTCCAGCACCTTGACTGCAGCCGGGCCTTGCAGGGCGAGCAGGGCACGCTCCTCGAACAGCGGCTTCACCTCGCAACGGCTGCCGATGTGGGTTTGCAGGTGAGCCAGGTCCTGCTCCTTCCATGCGGCGTTgacgccc > 1:2158272/1‑298 (MQ=255) cAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTATG‑CCGTCTTCTGC‑TTGAAAAAAAAACGACTGACGAAGCAGTCCACACCCAGCAGTTTTACCCGGCGGAACTGCATGAAGGTCATGCCGGCCACTTCTGTAGCCAGGCGTTCCAGCACCTTGACTGCATCCGGGCCTTGCAGGTCGAGCAGTGCACGCTCCTCGAACAGCGGCTGCACCTCGCAACGGCTGCCGATGTGTGTTTGCAGGTGAGCCCGGTCCTGCTCCTTTCAGTCTGCGTTgacgtcccga > 1:1554314/1‑295 (MQ=255) gCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTATG‑CCGTCTTCTGC‑TTGAAAAAAAAAAGGCTGACGAAGCAGTCCACACCCAGCAGTTTTACCCGGCGGAACTGCATAAAGGTCATGCCGGCCACTTCTGGAGCCAGGCGTTCCAGCACCTTGACTTCAGCCGGGCCTTGCAGTGCGAGCAGGGCACGCTCCTCGAACAGCGGCTGCACCTCGCAACGGCTGCCGATGTGGGTTTGCAGGTTAGCCAGGTCCTGCTCCTTGCAAGCGGCGTTGCCGACCAGGAACAgggggt > 1:2179135/1‑298 (MQ=255) gCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTA‑G‑CCGTCTTCGCCGGTGTAGCCCGAGCGGCTGACGAAGCAGTCCACACCCAGCAGTTTTACCCGGCGGAACTGCATGAAGGTCATGCCGGCCACTTCTGGAGCCAGGCGTTCCAGCACCTTGACTGCAGCCGGGCCTTGCAGGGCGAGCAGGGCACGCTCCTCGAACAGCGGCTGCACCTCGCAACGGCGGCCGATGTGGGTTTGCAGGTTGGCAAGGTCCTTCTTCTTGCAGGCGGCGTTGACGACCAGGACAAGGgtgt > 2:660267/1‑301 (MQ=255) ggCAGCGTTGACCGGTACCGAGATCTCGTATG‑CCGTCTTCTGC‑TTGAAAAAAAAAAGGCTGACGAAGCAGTCCACACCCAGCAGTTTTACCCGGCGGAACTGCATGAAGGTCATGCCGGCCACTTCTGGAGCCAGGCGTTCCAGCACCTTGACTGCAGCCGGGCCTTGCAGGGCGAGCAGGGCACGCTCCTCGAACAGCGGCTGCACCTCGCAACGGCTGCCGATGTGGGTTTGCAGGTGAGCCAGGTCCTGCTCCTTGCCGGCGGCGTTGACGACCAGGCACAGGGTGTCCTCGCCCAgg > 1:2058092/1‑301 (MQ=255) gCAGCGTTGACCGGTACCGAGATCTCGTA‑G‑CCGTCTTCGCCGGTGTAGCCCGAGCGGCTGACGAAGCAGTCCACACCCAGCAGTTTTACCCGGCGGAACTGCATGAAGGTCATGCCGGCCACTTCTGGAGCCAGGCGTTCCAGCACCTTGACTGCAGCCGGGCCTTGCAGGGCGAGCAGGGCACGCTCCTCGAACAGCGGCTGCACCTCGCAACGGCTGCCGATGGTGGTTTGCATGTGAGCCAGGTCCTGCCCCTTGCAGGCTGAGTTGACGAACAggcaacgagtgtcccagcctaggg > 2:2053/1‑279 (MQ=255) ccGAGATTTCGTA‑G‑CCGTCTTCGCCGGTGTAGCCCGAGCGGCTGACGAAGCAGTCCACACCCAGCAGTTGTACCCGGCGGAACTGCATGAAGGTCATGCCGGCCACTGCTGGAGCCAGGCGTTCCAGCACCTTGACTGCAGCCGGGCCTTGCAGGGCGAGCAGGGCACGCTCCTCGAACAGCGGCTGCACCTCGCAACGGCTGCCGATGTGGGTTTGCAGGTGAGCCAGGTCCTGCTCCTTGCAGGCGGCGTTGACGACCAGGAACAGGGTGTCCTCGCCCAGGTTGGCAACCATCAGgtc < 1:660502/301‑1 (MQ=255) ataTCTCATA‑G‑CCGTCTTCGCCGGTGTAGCCCGAGCGGCTGACGAAGCAGTCCACACCCAGCAGTTTTACCCGGCGGAAATGCATGAAGGTCATGCCGGACACTTCTGGAGCCAGGCGTTCCAGCACCTTGACTGCAGCCGGGCCTTGCAGGGCGAGCAGGGCACGCTCCTCTAACAGCGGCTGCACCTCGCAACGGCTGCCGATGTGTGTTTGCAGGTGAGCCAGGTCCTGCTCCTTGCAGGCGGCGTTGACGACCAGGAACAGGGTGTCCTCGCCCAGGTTGGCAACCATCAGgtcgtc < 1:2265369/299‑1 (MQ=255) aTCTCGTA‑G‑CCGTCTTCGCCGGTGTAGCCCGAGCGGCTGACGAAGCAGTCCACACCCAGCAGTTTTACCCGGCGGAACTGCATGAAGGTCATGCCGGCCACTTCTGGAGCCAGGCGTTCCAGCACCTTGACTGCAGCCGGGCCTTGCAGGGCGAGCAGGGCACGCTCCTCGAACAGCGGCTGCACCTCGCAACGGCTGCCGATGTGGGTTTGCAGGTGAGCCAGGTCCTGCTCCTTGCAGGCGGCGTTGACGACCAGGAACAGGGTGTCCTCGCCCAGGGTGGCAACCATACGGtcgtcgg > 2:543769/1‑300 (MQ=255) gTA‑G‑CCGTCTTCGCCGGTGTAGCCCGAGCGGCTGACGAAGCAGTCCACACCCAGCAGTTTTACCCGGCGGAACTGCATGAAGGTCATGCCGGCCACTTCTGGAGCCAGGCGTTCCGGCACCTTGACTGCAGCCGGGCCTTGCAGGGCGAGCAGGGCACGCTCCTCGAACAGCGGCTGCACCTCGCAACGGCTGCCGATGTTGGTTTGCAGGTGAGCCAGGTCCTGCTCCTTTCAGGCGGCGTTGACGACCAGGAAACGGGTGTCCTCGCCCAGGTTGGCAACCATCAgggcttcgtacatg > 2:303477/1‑289 (MQ=255) tA‑G‑CCGTCTTCGCCGGTGTAGCCCGAGCGGCTGACGAAGCAGTCCACACCCAGCAGTTTTACCCGGCGGAACTGCATGAAGGTCATGCCGGCCACTTCTGGAGCCAGGCGTTCCAGCACCTTGACTGCAGCCGGGCCTTGCAGGGCGAGCAGGGCACGCTCCTCGAACAGCGGCTGCACCTCGCAACGGCTGCCGATGTGGGTTTGCAGGTGAGCCAGGTCCTGCTCCTTGCAGGCGGCGTTGACGACCAGGAACCGGGTGTCCTCGCCCAGGTTGGCAACCATCAGGTCGTCGAGAATgg > 2:1644418/1‑300 (MQ=255) cGTCTTCGCCGGTGTAGCCCGAGCGGCTGACGAAGCAGTCCACACCCAGCAGTTTTACCCGGCGGAACTGCATGAAGGTCATGCCGGCCACTTCTGGAGCCAGGCGTTCCAGCACCTTGACTGCAGCCGGGCCTTGCAGGGCGAGCAGGGCACGCTCCTCGAACAGCGGCTGCACCTCGCAACGGCTGCCGATGTGGGTTTGCAGGTGAGCCAGGTCCTGCTCCTTGCAGGCGGCGTTGACGACCAGGAACAGGGTGTCCTCGCCCAGGTTGGCAACCATCAGGTGGTCGGGaagggcgcc > 1:1981657/1‑294 (MQ=255) tCTTCGCCGGTGTAGCCCGAGCGGCTGACGAAGCAGTCCACACCCAGCAGTTTTACCCGGCGGAACTGCATGAAGGTCATGCCGGCCACTTCTGGAGCCAGGCGTTCCAGCACCTTGACTGCAGCCGGGCCTTGCAGGGCGAGCAGGGCACGCTCCTCGAACAGCGGCTGCACCTCGCAACGGCTGCCGATGTGGGTTTGCAGGTGAGCCAGGTCCTGCTCCTTGCAGGCGGCGTTGACGACCAGGAACAGGGTGTCCTCGCCCAGGTTGGCAACCATCAGGTCGTCGAGAATGCCGCCtt < 1:543964/301‑1 (MQ=255) ccGGTGTAGCCCGAGCGGCTGACGAAGCAGTCCACACCCAGCAGTTTTACCCGGCGGAACTGCATGAAGGTCATGCCGGCCACTTCTGGAGCCAGGCGTTCCAGCACCTTGACTGCAGCCGGGCCTTGCAGGGCGAGCAGGGCACGCGCCTCGAACAGCGGCGGCACCTCGCAACGGCTGCCGATGTGGGTTTGCAGGTGAGCCAGGTCCTGCCCCTTGCAGGCCGCGTTGACGACCAGGAACAGGGTGTCCTCGCCCAGGTTGGCAACCAGCAGGTCGGCGAGAATGCCGCCTTGCTCAt > 2:1784359/1‑301 (MQ=255) | TCGCCTCGGCACCCGGGAAGCCGGCAGCACGT‑GCACCGTCGGCACGGCGCACCTTGGAAATTGCCCACAGCAGGCTGGCTTCGATCGGCGTAGTCTCGCTGTTCATGTCGTGGCCATACAGGCACAGGCCAGCTTCCAGGCGCAGCGAGTCGCGTGCGCCCAAGCCGATCGGCTGTACTTCCGGCTCGGCCATCAGGCGGCGGGCCAAGGCGTCGGCAGCGTTGACCGGTACCGAGATCTCGTA‑G‑CCGTCTTCGCCGGTGTAGCCCGAGCGGCTGACGAAGCAGTCCACACCCAGCAGTTTTACCCGGCGGAACTGCATGAAGGTCATGCCGGCCACTTCTGGAGCCAGGCGTTCCAGCACCTTGACTGCAGCCGGGCCTTGCAGGGCGAGCAGGGCACGCTCCTCGAACAGCGGCTGCACCTCGCAACGGCTGCCGATGTGGGTTTGCAGGTGAGCCAGGTCCTGCTCCTTGCAGGCGGCGTTGACGACCAGGAACAGGGTGTCCTCGCCCAGGTTGGCAACCATCAGGTCGTCGAGAATGCCGCCTTGCTCAT > AE015451/1124311‑1124865 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |