Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	4236757	4239342	2586	28 [26]	[26] 28	[catA‑I]–catR	[catA‑I],catC,catB,catR

AGGCCATATGAACACACCATGCCCACAGGGGCTGTATAGCCCTGCCCTATTGGCTATGCCGGCCCCGTATACCCATCGGTATAGGGATGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAGGATCATGTGCGCCACTTCCCGTTCGCGGTCGGTCAGCACCTGGCAGCCGAAGCTGTCGAACGCTGCCTGCAGGCTGCCGCG  >  AE015451/4239247‑4239644                                                                                                 |                                                                                                                                                                                                                                                                                                              agaacgggagtgcgccttgagcgacacgaagCTGTATAGCCCTGCCCTATTGGCTATGCCGGCCCCGTATACCCATCGGTATAGGGATGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCTGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCa                                                                                                   >  1:613509/31‑301 (MQ=255)      gggagtgcgccttgagcgacacgaagCTGTATAGCCCTGCCCTATTGGCTATGCCGGCCCCGTATACCCATCGGTATAGGGATGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAg                                                                                              >  3:99439/26‑301 (MQ=255)           ggtgccttgagcgagacgaagCTGTATAGCCCTGCCCGAGTGGCTATGCCGGCCCCGTATACCCATCGGTATAGGGATGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAACGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGccc                                                                                         <  2:629243/281‑1 (MQ=255)                 ttgagcgacacgaagCTGTATAGCCCTGCCCTATTGGCTATGCCGGCCCCGTATACCCATCGGTATAGGGATGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAg                                                                                   <  1:71701/287‑1 (MQ=255)                  ggggcgacccaaagccgtcaaaccctgccccATTGGCTATGCCGGCCCCGTATACCCATCGGTATAGGGATGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAgg                                                                                  <  2:643970/279‑1 (MQ=255)                    agcgacacgaagCTGTATAGCCCTGCCCTATTGGCTATGCCGGCCCCGTATACCCATCGGTATAGGGATGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAGGAt                                                                                >  1:515331/12‑301 (MQ=255)                     gcgacacgaagCTGTATAGCCCTGCCCTATTGGCTATGCCGGCCCCGTATACCCATCGGTATAGGGATGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCTGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAGGATc                                                                               <  3:613523/291‑1 (MQ=255)                     gcgacacgaagCTGTATAGCCCTGCCCTATTGGCTATGCCGGCCCCGTATACCCATCGGTATAGGGATGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAGGATc                                                                               <  3:114544/291‑1 (MQ=255)                        acacgaagCTGTATAGCCCTGCCCTATTGGCTATGCCGGCCCCGTATACCCATCGGTATAGGGATGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAGGATCAtg                                                                            <  3:19973/294‑1 (MQ=255)                         cacgaagCTGTATAGCCCTGCCCTATTGGCTATGCCGGCCCCGTATACCCATCGGTATAGGGATGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAGGATCAtgt                                                                           >  4:262083/7‑301 (MQ=255)                                     taGCCCTGCCCTATTGGCTATGCCGGCCCCGTATACCCATCGGTATAGGGATGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAGGATCATGTGCGCCACTTccc                                                               <  1:99437/301‑1 (MQ=255)                                      ggcccggcccatgtGGCTAGGCCGGCCCCGTATACCCATCGGTATAGGGATGTTCCCATGGAGCTGGTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAGGATCATGTGCGCCACTTCCCg                                                              <  2:371005/288‑1 (MQ=255)                                        ccctgccctATTGGCTATGCCGGCCCCGTATACCCATCGGTATAGGGATGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAGGATCATGTGCGTCACTTCCCGtt                                                            <  3:516846/301‑1 (MQ=255)                                        ccctgccctATTGGCTATGCCGGCCCCGTATACCCATCGGTATAGGGATGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAGGATCATGTGCGCCACTTCCCGtt                                                            <  3:474160/301‑1 (MQ=255)                                                   tGGCTATGCCGGCCCCGTATACCCATCGGTATAGGGATGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAGGATCATGTGCGCCACTTCCCGTTCGCggtcggtc                                                 <  4:78550/301‑1 (MQ=255)                                                    ggCTATGCCGGCCCCGTATACCCATCGGTATAGGGATGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCCCCGAGTGCCCGCGCAGGGTCATGTGCGCCACTTCCTGTTcgccgtgtggtg                                                >  2:459863/1‑292 (MQ=255)                                                               ccccGTATACCCATCGGTATAGGGATGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGATTGCCCGCGCAGGATCATGTGCGCCACTTCCCGTTCGCGGTCGGTCAGCACCTGGCAg                                     >  2:125204/1‑301 (MQ=255)                                                                     ataCCCATCGGTATAGGGATGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACTAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAGGATCATGTGCGCCACTTCCCGTTCGCGGTCGGTCAGCACCTGGCAGCCGAAg                               <  3:544375/301‑1 (MQ=255)                                                                      tttccgatcttataGGGATGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAGGATCATGTGCGCCACTTCCCGTTCGCGGTCGGTCAGCACCTGGCAGCCGAAGc                              <  3:388118/291‑1 (MQ=255)                                                                       aCCCATCGGTATAGGGATGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAGGATCATGTGCGCCACTTCCCGTTCGCGGTCGGTCAGCACCTGGCAGCCGAAGCt                             <  4:509736/301‑1 (MQ=255)                                                                                tataGGGATGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAGGATCATGTGCGCCACTTCCCGTTCGCGGTCGGTCAGCACCTGGCAGCCGAAGcagatcggaag                    >  1:388108/1‑291 (MQ=255)                                                                                   aGGGATGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAGGATCATGTGCGCCACTTCCCGTTCGCGGTCGGTCGGCACCTGGCAGCCGCAGCTGTCGacccctgc                 >  2:763361/1‑294 (MQ=255)                                                                                        tGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAGGATCATGTGCGCCACTTCCCGTTCGCGGTCGGTCAGCACCTGGCAGCCGAAGCTGTCGAACGCTGCCTGCa            <  3:515345/301‑1 (MQ=255)                                                                                            cccATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAGGATCATGTGCGCCACTTCCCGTTCGCGGTCGGTCAGCACCTGGCAGCCGAAGCTGTCGAACGCTGCCTGCAGGCt        <  4:109841/301‑1 (MQ=255)                                                                                             atcttGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAGGATCATGTGCGCCACTTCCCGTTCGCGGTCGGTCAGCACCTGGCAGCCGAAGCTGTCGAACGCTGCCTGCAGGCTg       <  1:22008/298‑1 (MQ=255)                                                                                              cATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTACAATCATCGGCAAATGATCACCGCGTAACCAGTAGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAGGATCATGTGCGCCACTTCCCGTTCGCGGTCGGTCAGCACCTGGCAGCCGAAGCTGTCGAACGCTGCCTGCAGGCTGc      <  1:559317/301‑1 (MQ=255)                                                                                                 tGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAGGATCATGTGCGCCACTTCCCGTTCGCGGTCGGTCAGCACCTGGCAGCCGAAGCTGTCGAACGCTGCCTGCAGGCTgagat   >  3:22008/1‑297 (MQ=255)                                                                                                 tGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAA‑ACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAGGATCATGTGCGCCACTTCCCGTTCGCGGTCGGTCAGCACCTGGCAGCCGAAGCTGTCGAACGCTGCCTGCAGGCTGCcgcg  >  3:429562/1‑301 (MQ=255)                                                                                                 |                                                                                                                                                                                                                                                                                                              AGGCCATATGAACACACCATGCCCACAGGGGCTGTATAGCCCTGCCCTATTGGCTATGCCGGCCCCGTATACCCATCGGTATAGGGATGTTCCCATTGAGCTGTTTCATGCTGCGACACGCGAATCGCCAGGGCTCAAGACAGTCAATCTAAAATCATCGGCAAATGATCACCGCGTAACCAGTCGATAAACCGTGCAAACAACTCCGATTGCGAGTTGATCTCAAGCTTCATGTACAGGTTCTTGCGGTGCATGCGCACGGTCTCCGGCGAAATACCCAACTCCAGCGCGGTAGATTTCACCGAGTGCCCGCGCAGGATCATGTGCGCCACTTCCCGTTCGCGGTCGGTCAGCACCTGGCAGCCGAAGCTGTCGAACGCTGCCTGCAGGCTGCCGCG  >  AE015451/4239247‑4239644

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑