| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 4769220 | 81 (0.770) | 4 (0.040) | 4/578 | 8.2 | 2.5% | coding (10047/10413 nt) | pvdD | non‑ribosomal peptide synthetase |
| ? | AE015451 | 5772390 = | 231 (2.270) | coding (573/2004 nt) | betT‑I | Choline transporter | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAGTGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGTGATGAACACCTGGGTCAGTTCATCGACGCCCAACCCCGTCGCCCCCTGCCTGTTGCCCAGTGCCTGCGTGATCAGCGCCCGCGCACTCCCCTCGCCTTCCGGCAGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/4768911‑4769220‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcagcgccCTTGACCCAACGCTCGCCCACCAGCGGGTACAGCGCCGAGCGCAGTGCCAGCGGCTGGTTGTGGCGGTAGGCAAAGTAACCCACGGCCAGGCCGACCAGGGCATAGATCGCCCAGCCGTGCAGGCCCCAGTGCAGGAAGGTCAGCTGCAGGCCCTGGCGCGCGGCCTCGAGGCTGGCAGGAGTGCCTTCCGGTGGGTTGAAGTAGTGGTCCAGGGGCTCGGAGGCGCCGAAGTACAGCAGCGAAATACCGATACCGGACGAGAACAGCATGCCGGCCCAGGCGCCGTAGCTGAAGTCAGG > AE015451/5772390‑5772689 cccgacacggcgaccttccgatctCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAGTGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGTGATGAACACCTGGGTCAGTTCATCGACGCCCAACCCCGTCGCCCCCTGCCTGTTGCCCAGTGCCTGCGTGATCAGCGCCCGCGCACTCCCCTCGCCTTCC < 2:97175/277‑1GTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAGTGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGTGATGAACACCTGGGTCAGTTCATCGACGCCCAACCCCGTCGCCCCCTGCCTGTTGCCCAGTGCCTGCGTGATCAGCGCCCGCGCACTCCCCTCGCCTTCC < 4:176169/301‑1 ggCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAGTGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGTGATGAACACCTGGGTCAGTTCATCGACGCCCAACCCCGTCGCCCCCTGCCTGTTGCCCAGTGCCTGCGTGATCAGCGCCCGCGCACTCCCCTCGCCTTCCGGC < 2:675166/299‑1 AGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAGTGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGTGATGAACACCTGGGTCAGTTCATCGACGCCCAACCCCGTCGCCCCCTGCCTGTTGCCCAGTGCCTGCGTGATCAGCGCCCGCGCACTCCCCTCTCCTTCCGGCACCGCCC > 2:825084/1‑301 CGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAGTGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGTGATGAACACCTGGGTCAGTTCATCGACGCCCAACCCCGTCGCCCCCTGCCTGTTGCCCAGTGCCTGCGTGATCAGCGCCCGCGCACTCCCCTCTCCTTCCagatcggaagaccccacgtctgca > 4:97205/1‑277 GGAAGTGCCCACAGGCCAGCAGCCGCGCAGTGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGTGATGAACACCTGGGTCAGTTCATCGACGCCCAACCCCGTCGCCCCCTGCCTGTTGCCCAGTGCCTGCGTGATCAGCGCCCGCGCACTCCCCCCGCCTTCCGGCAGCGCCCcctcccgcttccccggccagtc > 2:200701/1‑279 CAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGTGATGAACACCTGGGTCAGTTCATCGACGCCCAACCCCGTCGCCCCCTGCCTGTTGCCCAGTGCCTGCGTGATCAGCGCCCGCGCACTCCCCTCGCCTTCCGGCAGCGCCCTTGACCCAACGCTCGCCCACCAGCGGGTACAGCGCCGAGCGCAGTGCCAGCGGCTGGTTGTGGCGGT > 4:635623/1‑301 aGAACACCTGGGTCAGTGCATCGACGGCCAACCCCGTCGCCCCCTGCCTGTTGCCCAGTGCCTGCGTGATCAGCGCCCGCGCACTCCCCTCGCCTTCCGGCAGCGCCCTTGACCCAACGCTCGCCCACCAGCGGGTACAGCGCCGAGCGCAGTGCCAGCGGCTGGTTGTGGCGGTAGGCAAAGTAACCCACGGCCAGGCCGACCAGGGCATAGATCGCCCAGCCGTGCAGGCCCCAGTGCAGGAAGGTCAGCTGCAGGCCCTGGCGCGCGGCCTCGAGGCTGGCAGGAGTGCCTTCCGGTG < 2:635412/300‑1 CGGCAGCGCCCTTGACCCACCGCTCGCCCACCAGCGGGTACAGCGCCGAGCGCAGTGCCAGCGGCTGGTTGTGGCGGTAGGCAAAGTAACCCACGGCCAGGCCGACCAGGGCATAGATCGCCCAGCCGTGCAGGCCCCAGTGCAGGAAGGTCAGCTGCAGGCCCTGGCGCGCGGCCTCGAGGCTGGCAGGAGTGCCTTCCGGTGGGTTGAAGTAGTGGTCCAGGGGCTCGGAGGCGCCGAAGTACAGCAGCGAAATACCGATACCGGACGAGAACAGCATGCCGGCCCAGGCGCCGTAGCT < 4:551567/301‑1 GGCAGCGCCCTTGACCCAACGCTCGCCCACCAGCGGGTACAGCGCCGAGCGCAGTGCCAGCGGCTGGTTGTGGCGGTAGGCAAAGTAACCCACGGCCAGGCCGACCAGGGCATAGATCGCCCAGCCGTGCAGGCCCCAGTGCAGGAAGGTCAGCTGCAGGCCCTGGCGCGCGGCCTCGAGGCTGGCAGGAGTGCCTTCCGGTGGGTTGAAGTAGTGGTCCAGGGGCTCGGAGGCGCCGAAGTACAGCAGCGAAATACCGATACCGGACGAGAACAGCATGCGGGCCCAGGCGCCTTAGatg > 4:210069/1‑298 GGCAGCGCCCTTGACCCAACGCTCGCCCACCAGCGGGTACAGCGCCGAGCGCAGTGCCAGCGGCTGGTTGTGGCGGTAGGCAAAGTAACCCACGGCCAGGCCGACCAGGGCATAGATCGCCCAGCCGTGCAGGCCCCAGTGCAGGAAGGTCAGCTGCAGGCCCTGGCGCGCGGCCTCGAGGCTGGCAGGAGTGCCTTCCGGTGGGTTGAAGTAGTGGTCCAGGGGCTCGGAGGCGCCGAAGTACAGCAGCGAAATACCGATACCGGACGAGAACAGCATGCCGGCCCAGGCGCCGTAGCcg > 1:185660/1‑299 GGCAGCGCCCTTGACCCAACGCTCGCCCACCAGCGGGTACAGCGCCGAGCGCAGTGCCAGCGGCTGGTTGTGGCGGTAGGCAAAGTAACCCACGGCCAGGCCGACCAGGGCATAGATCGCCCAGCCGTGCAGGCCCCAGTGCAGGAAGGTCAGCTGCAGGCCCTGGCGCGCGGCCTCGAGGCTGGCAGGAGTGCCTTCCGGTGGGTTGAAGTAGTGGTCCAGGGGCTCGGAGGCGCCGAAGTACAGCAGCGAAATACCGATACCGGACGAGAACAGCATGCCGGCCCAGGCGCCGTAGCTG > 3:726111/1‑301 CAGCGCCCTTGCCCCAACGCTCGCCCACCAGCGGGTACAGCGCCGATCGCAGTGCCAGCGGCTGGTTGTGTCGGTAGGCAAAGTAACCCACGGCCAGGCCGACCAGGGCATAGATCGCCCAGCCGTGCAGACCCCAGTGCAGGAAGGTCAGCTGCAGGCCCTGGCGCGCGGCCTCGAGGCTGGCAGGAGTGCCTTCCGGTGGGTTGAAGTAGTGGTCCAGGGGCTCGGAGGCGCCGAAGTACAGCAGCGAAATACCGATACCGGACGAGAACAGCATGCCGGCCCAGGCGCCGTAGCTGAA < 3:206334/301‑1 AGCGCCCTTGACCCAACGCTCGCCCACCAGCGGGTACAGCGCCGAGCGCAGTGCCAGCGGCTGGTTGTGGCGGTAGGCAAAGTAACCCACGGCCAGGCCGACCAGGGCATAGATCGCCCAGCCGTGCAGGCCCCAGTGCAGGAAGGTCAGCTGCAGGCCCTGGCGCGCGGCCTCGAGGCTGGCAGGAGTGCCTTCCGGTGGGTTGAAGTAGTGGTCCAGGGGCTCGGAGGCGCCGAAGTACAGCAGCGAAATACCGATACCGGCCGAGACCAGCATCCCGGCCCAGGCGCCGTAGCctaag > 2:267896/1‑296 GCCCTTGACCCAACGCTCGCCCACCAGCGGGTACAGCGCCGAGCGCAGTGCCAGCGGCTGGTTGTGGCGGTAGGCAAAGTAACCCACGGCCAGGCCGACCAGGGCATAGATCGCCCAGCCGTGCAGGCCCCAGTGCAGGAAGGTCAGCTGCAGGCCCTGGCGCGCGGCCTCGAGGCTGGCAGGAGTGCCTTCCGGTGGGTTGAAGTAGTGGTCCAGGGGCTCGGAGGCGCCGAAGTACAGCAGCGAAATACCGATACCGGACGAGAACAGCATGCCGGCCCAGGCGCCGTAGCTGAAGTCA < 3:600352/301‑1 CCCTTGACCCAACGCTCGCCCACCAGCGGGTACAGCGCCGAGCGCAGTGCCAGCGGCTGGTTGTGGCGGTAGGCAAAGTAACCCACGGCCAGGCCGACCAGGGCATAGATCGCCCAGCCGTGCAGGCCCCAGTGCAGGAAGGTCAGCTGCAGGCCCTGGCGCGCGGCCTCGAGGCTGGCAGGAGTGCCTTCCGGTGGGTTGAAGTAGTGGTCCAGGGGCTCGGAGGCGCCGAAGTACAGCAGCGAAATACCGATACCGGACGAGAACAGCATGCCGGCCCAGGCGCCGTAGCTGAAGTCAG > 4:367964/1‑301 CCCTGGACCCAACGCTCGCCCACCAGCGGGTACAGCGCCGAGCGCAGTGCCAGCGGCTGGTTGTGGCGGTAGGCAAAGTAACCCACGGCCAGGCCGACCAGGGCATAGATCGCCCAGCCGTGCAGGCCCCAGTGCAGGAAGGTCAGCTGCAGGCCCTGGCGCGCGGCCTCGAGGCTGGCAGGAGTGCCTTCCGGTGGGTTGAAGTAGTGGTCCAGGGGCTCGGAGGCGCCGAAGTACAGCAGCGAAATACCGATACCGGACGAGAACAGCATGCCGGCCCAGGCGCCGTAGCTGAAGTCAG < 1:343525/301‑1 CCTTGACCCACCGCTCGCCCACCAGCGGGTACAGCGCCGAGCGCAGTGCCAGCGGCTGGTTGTGGCGGTAGGCAAAGTAACCCACGGCCAGGCCGACCAGGGCATAGATCGCCCAGCCGTGCAGGCCCCAGTGCAGGAAGGTCAGCTGCAGGCCCTGGCGCGCGGCCTCGAGGCTGGCAGGAGTGCCTTCCGGTGGGTTGAAGTAGTGGTCCAGGGGCTCGGAGGCGCCGAAGTACAGCAGCGAAATACCGATACCGGACGAGAACAGCATGCCGGCCCAGGCGCCGTAGCTGAAGTCAGG < 3:226925/301‑1 GTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAGTGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGTGATGAACACCTGGGTCAGTTCATCGACGCCCAACCCCGTCGCCCCCTGCCTGTTGCCCAGTGCCTGCGTGATCAGCGCCCGCGCACTCCCCTCGCCTTCCGGCAGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/4768911‑4769220‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcagcgccCTTGACCCAACGCTCGCCCACCAGCGGGTACAGCGCCGAGCGCAGTGCCAGCGGCTGGTTGTGGCGGTAGGCAAAGTAACCCACGGCCAGGCCGACCAGGGCATAGATCGCCCAGCCGTGCAGGCCCCAGTGCAGGAAGGTCAGCTGCAGGCCCTGGCGCGCGGCCTCGAGGCTGGCAGGAGTGCCTTCCGGTGGGTTGAAGTAGTGGTCCAGGGGCTCGGAGGCGCCGAAGTACAGCAGCGAAATACCGATACCGGACGAGAACAGCATGCCGGCCCAGGCGCCGTAGCTGAAGTCAGG > AE015451/5772390‑5772689 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |