Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	AE015451	1,709,370	2640 bp→CGGCCGC		[ppc]	[ppc]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	1709370	1712009	2640	53 [0]	[0] 54	[ppc]	[ppc]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1709369	0 (0.000)	52 (0.620) +CGGCCGC	49/538	1.4	100%	intergenic (‑136/‑13)	PP_1504/ppc	conserved protein of unknown function/Phosphoenolpyruvate carboxylase
	?	AE015451	1712010 =	0 (0.000)					intergenic (+1/‑257)	ppc/adk	Phosphoenolpyruvate carboxylase/Adenylate kinase

GGGTACATGTCGATCAGCGCGGCCAGGCGCGCTTCGGACTCCAGGTCCAGGTGCAGGACATGACCGGTACGGCTGAGGGTACCGGCGGCATTCTGTTCCCAGTGCTGGGCGAGTTCACGGATTTTCATGATGACCTCTGTTGACGCCTGGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/1709073‑1709369 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGT‑ATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCCCTGGTCGCCGAATCCATTGAATTTCATACAAAAATTTGAGGAGCACAAGATGCGCGTAATTCTGCTGGGAGCTCCCGGGGCC  >  AE015451/1712010‑1712299                                                                                                                                                                                                                                                                                                          |||||||                                                                                                                                                                                                                                                                                                    GGGTACATGTCGATCAGCGCGGCCAGGCGCGCTTCGGACTCCAGGTCCAGGTGCAGGACATGACCGGTACGGCTGAGGGTACCGGCGGCATTCTGTTCCCAGTGCTGGGCGAGTTCACGGATTTTCATGATGACCTCTGTTGACGCCTGGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGC                                                                                                                                                                                                                                                                                                        <  2:813683/301‑1                         AGGCGCGCTTCGGACTCCAGGTCCAGGTGCAGGACATGACCGGTACGGCTGAGGGTACCGGCGGCATTCTGTTCCCAGTGCTGGGCGAGTTCACGGATTTTCATGATGACCTCTGTTGACGCCTGGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTC                                                                                                                                                                                                                                                                                 >  1:189905/1‑300                          GGCGCGCTTCGGACTCCAGGTCCAGGTGCAGGACATGACCGGTACGGCTGAGGGTACCGGCGGCATTCTGTTCCCAGTGCTGGGCGAGTTCACGGATTTTCATGATGACCTCTGTTGACGCCTGGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTG                                                                                                                                                                                                                                                                               <  1:906588/301‑1                          GGCGCGCTTCGGACTCCAGGTCCAGGTGCAGGACATGACCGGTACGGCTGAGGGTACCGGCGGCATTCTGTTCCCAGTGCTGGGCGAGTTCACGGATTTTCATGATGACCTCTGTTGACGCCTGGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGACCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCT                                                                                                                                                                                                                                                                                <  1:557487/300‑1                                    GGACTCCAGGTCCAGGTGCAGGACATGACCGGTACGGCTGAGGGTACCGGCGGCATTCTGTTCCCAGTGCTGGGCGAGTTCACGGATTTTCATGATGACCTCTGTTGACGCCTGGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCC                                                                                                                                                                                                                                                                      >  1:604659/1‑300                                           AGGTCCAGGTGCAGGACATGACCGGTACGGCTGAGGGTACCGGCGGCATTCTGTTCCCAGTGCTGGGCGAGTTCACGGATTTTCATGATGACCTCTGTTGACGCCTGGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGG                                                                                                                                                                                                                                                               >  1:895962/1‑300                                           AGGTCCAGGTGCAGGACATGACCGGTACGGCTGAGGGTACCGGCGGCATTCTGTTCCCAGTGCTGGGCGAGTTCACGGATTTTCATGATGACCTCTGTTGACGCCTGGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAG                                                                                                                                                                                                                                                                <  2:117042/299‑1                                                       AGGACATGACCGGTACGGCTGAGGGTACCGGCGGCATTCTGTTCCCAGTGCTGGGCGAGTTCACGGATTTTCATGATGACCTCTGTTGACGCCTGGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGG                                                                                                                                                                                                                                                   >  1:36782/1‑300                                                                  GGTACGGCTGAGGGTACCGGCGGCATTCTGTTCCCAGTGCTGGGCGAGTTCACGGATTTTCATGATGACCTCTGTTGACGCCTGGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCG                                                                                                                                                                                                                                       >  1:170124/1‑301                                                                                    GGCGGCATTCTGTTCCCAGTGCTGGGCGAGTTCACGGATTTTCATGATGACCTCTGTTGACGCCTGGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGC                                                                                                                                                                                                                           >  1:86520/1‑295                                                                                       GGCATTCTGTTCCCAGTGCTGGGCGAGTTCACGGATTTTCATGATGACCTCTGTTGACGCCTGGAAAGGCTGAACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGC                                                                                                                                                                                                                           <  2:86518/292‑1                                                                                                 TCCCAGTGCTGGGCGAGTTCACGGATTTTCATGATGACCTCTGTTGACGCCTGGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTC                                                                                                                                                                                                         >  1:232211/1‑300                                                                                                  CCCAGTGCTGGGCGAGTTCACGGATTTTCATGATGACCTCTGTTGACGCCTGGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATAACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCT                                                                                                                                                                                                                 <  2:36780/291‑1                                                                                                                  TTCACGGATTTTCATGATGACCTCTGTTGACGCCTGGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTTACGGCCATACAGGCCCGGCCCAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGG                                                                                                                                                                                                           >  2:245235/1‑281                                                                                                                  TTCACGGATTTTCATGATGACCTCTGTTGACGCCTGGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGG                                                                                                                                                                                                           <  1:245241/281‑1                                                                                                                        GATTTTCATGATGACCTCTGTTGACGCCTGGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCACAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGC                                                                                                                                                                                  <  2:604634/300‑1                                                                                                                          TTTTCATGATGACCTCTGTTGACGCCTGGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCT                                                                                                                                                                                    >  1:105533/1‑296                                                                                                                           TTTCATGATGACCTCCGTGGACGCCTGGAAAGGCTGCACTGAATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGGTCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGAACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTACCCGGTCAGCCGCAAGTGGCGCATTCCTGCAAC                                                                                                                                                                               <  2:625835/300‑1                                                                                                                            TTCATGATGACCTCTGTTGACGCCTGGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCGCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACC                                                                                                                                                                                                                     >  2:490522/1‑261                                                                                                                            TTCATGATGACCTCTGTGGACTCCTGGAAAGGCTGACCTGCATGGGAGTGCTTGGCTTGCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCAGCAACT                                                                                                                                                                              <  1:490543/300‑1                                                                                                                                TGATGACCTCTGTTGACGCCTGGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTTCGCCAGGCGCAACCGCCTGCCCTGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGG                                                                                                                                                                         >  2:723508/1‑301                                                                                                                                  ATGACCTCTGTTGACGCCTGGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTTCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTG                                                                                                                                                                                              >  1:752338/1‑278                                                                                                                                     ACCTCTGTTGACGCCTGGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCCCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGG                                                                                                                                                                         >  2:274303/1‑296                                                                                                                                      CCTCTGTTGACGCCTGGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTT                                                                                                                                                                   <  1:274310/301‑1                                                                                                                                                     GGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCC                                                                                                                                                                                     >  2:557468/1‑268                                                                                                                                                     GGAAAGGCTGCACTGAATGTGAGTGCTGTGCTTTAACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCT                                                                                                                                                                                    <  2:196/269‑1                                                                                                                                                                     ATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGTCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGC                                                                                                                                                    >  2:459388/1‑285                                                                                                                                                                          AGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTG                                                                                                                                                          <  1:207818/274‑1                                                                                                                                                                          AGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTG                                                                                                                                                          >  2:207813/1‑274                                                                                                                                                                           GTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGG                                                                                                                                                                         >  1:434601/1‑258                                                                                                                                                                            TGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTG‑GTGATCTTTAGCAGCCTT                                                                                                                             >  2:5381/1‑300                                                                                                                                                                                  GCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGT‑ATCTTGAGCAGCCTTC                                                                                                                            >  1:132523/1‑295                                                                                                                                                                                  GCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCAGCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGT‑ATCTTGAGCAGCCTTC                                                                                                                            <  2:132520/295‑1                                                                                                                                                                                     TTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGTCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGT‑ATCTTGAGCAGCCTTCTGACCGA                                                                                                                     <  1:459409/299‑1                                                                                                                                                                                             AGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGT‑ATCTTGAGCAGCCTTCTGACCGATTTATGGTC                                                                                                            <  1:5383/300‑1                                                                                                                                                                                                           GATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCGACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGT‑TTGTTGACGAGCCTTCTTGCCTATTTAGGGTCATACCCGATTTTCC                                                                                              >  2:760026/1‑300                                                                                                                                                                                                           GATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACGTTGGGACGCTTGTTTGGCTGCCGGGCGCTGTGT‑ATCTTGAGCAGCCTT                                                                                                                             >  1:200376/1‑269                                                                                                                                                                                                                 GGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGT‑ATCTTGAGCAG                                                                                                                                 >  1:663971/1‑259                                                                                                                                                                                                                 GGCTTGCAATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGT‑ATCTTGAGCAG                                                                                                                                 <  2:663946/259‑1                                                                                                                                                                                                                      GCCATAGTCGCTCGGCTGTGGGAACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGT‑ATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCC                                                                                    <  2:170120/299‑1                                                                                                                                                                                                                       CCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGTGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGT‑ATCTTGAGCAGCCTTCTGACCGATTTATTGTCATACCCGATTTTCCAGACTTGGCCCT                                                                                  >  2:483415/1‑300                                                                                                                                                                                                                       CCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGT‑ATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCCCT                                                                                  >  1:364503/1‑300                                                                                                                                                                                                                           CGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGAGGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGAACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGT‑ATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCC                                                                                    <  1:760052/294‑1                                                                                                                                                                                                                                        TGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGT‑ATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTTGCCCTTGTCGCCGAATCCATT                                                                  >  1:732030/1‑299                                                                                                                                                                                                                                         GGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGT‑ATCTTG                                                                                                                                      <  2:232206/230‑1                                                                                                                                                                                                                                                           CCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGT‑ATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCCCTGGTCGCCGAATCCATTGAATTTCATACAAAAATTTG                                              >  1:503494/1‑300                                                                                                                                                                                                                                                                cgaTCCTGCACAGGGCGCGATGAGCCTGATAGGGATGCAAAGCGGCCGCGTGCAAGCCCGGGTCATGTCTGGGGACGGCGAAACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTG                                                                                                                                                                                              <  2:752312/149‑1                                                                                                                                                                                                                                                                 GCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGT‑ATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCCCTGGTCGCCGAATCCATTGAATTTCATACAAAAATTTGAGGAGC                                        >  1:201291/1‑300                                                                                                                                                                                                                                                                       GCACAGGGCGCGCTGAGGCTGTTAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGT‑ATCTTGAGCAGCCTT                                                                                                                             <  2:189901/209‑1                                                                                                                                                                                                                                                                                           GATAGGGATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGT‑ATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCCCTGGTCGCCGAATCCATTGAATTTCATACAAAAATTTGAGGAGCACAAGATGC                               >  1:524362/1‑283                                                                                                                                                                                                                                                                                                 GATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGT‑ATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCCCTGGTCGCCGAATCCATTGAATTTCATACAAAAATTTGCGGAGCACAAGATGCGCGTAATTCTGCTGGGAGCTCC         >  1:214850/1‑299                                                                                                                                                                                                                                                                                                  ATGCAACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGT‑ATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCCCTGGTCGCCGAATCCATTGAATTTCATACAAAAATTTGAGGAGCACAAGATTCGCGTAATT                       >  2:869859/1‑284                                                                                                                                                                                                                                                                                                      AACGCGGCCGCGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGT‑ATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCCCTGGTCGCCGAATCCATTGAATTTCATACAAAAATTTGAGGAGCACAAGATGCGTGTAATTCTGCTGGGAGCTCCCGGGGCC  <  1:723534/301‑1                                                                                                                                                                                                                                                                                                          |||||||                                                                                                                                                                                                                                                                                                    GGGTACATGTCGATCAGCGCGGCCAGGCGCGCTTCGGACTCCAGGTCCAGGTGCAGGACATGACCGGTACGGCTGAGGGTACCGGCGGCATTCTGTTCCCAGTGCTGGGCGAGTTCACGGATTTTCATGATGACCTCTGTTGACGCCTGGAAAGGCTGCACTGCATGGGAGTGCTGTGCTTTCACTTTAGTTTGGTTTGGCCGATCACGGCTTGCCATCGTCGCTCGGCTGTGGGCACTCTTGGGGGATACCGCTCGCTCCTGCACAGGGCGCGCTGAGGCTGATAGGGATGCAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/1709073‑1709369 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGT‑ATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCCCTGGTCGCCGAATCCATTGAATTTCATACAAAAATTTGAGGAGCACAAGATGCGCGTAATTCTGCTGGGAGCTCCCGGGGCC  >  AE015451/1712010‑1712299

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.