| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 5696567 | 25 (0.240) | 12 (0.120) | 12/584 | 5.4 | 41.1% | intergenic (+19/‑193) | pyrC'/hslV | dihydroorotase‑like protein/peptidase component of the ATP‑dependent HslVU protease |
| ? | AE015451 | 5696629 = | 10 (0.100) | intergenic (+81/‑131) | pyrC'/hslV | dihydroorotase‑like protein/peptidase component of the ATP‑dependent HslVU protease | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
GTCGAGTTGCTGCTGCCACTGGCCATGACCCTGGTGCAGGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/5696261‑5696567‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgggcaTGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCATCCCCCCCGGTTGAAATCCTTCCCCCCACCCCCATATGAGTCTGCATCAGGCACTTTCGCCCCGCTGCGTGGAGACTCTCCCCTTGACCACAATCGTTTCTGTCCGCCGTAACGGCAAAGTCGTCATGGGCGGCGACGGCCAGGTATCCCTCGGCAACACCGTGATGAAAGGCAACGCCAAGAAGGTGCGCCGCCTGTACCACGGCCAGGTCATCGCGGGCTTCGCCGGCGCCACTGCCGACGCCTTCA > AE015451/5696629‑5696925 gtcggggtgtcGCTGTCACTGGCCAGCACCCTGGGGCAGGACGGGCCGCTCGACCTGCCGACCTTGCCGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAG < 2:2989/290‑1GTCGAGTTGCTGCTGCCACTGGCCATGACCCTGGTGCAGGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCAGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTTGTCGATTGCCCCATCTGCCACGAGGCCCGAGTCCCATGCTTAG > 2:806790/1‑301 gGAGTTGCTGCTGCCACTGGCCATGACCCTGGTGCAGGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG < 1:22693/300‑1 CGAGTTGCTGCTGCCACTGGCCATGACCCTGGTGCAGGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG > 1:302781/1‑301 GTTGCTGCTGCCACTGGCCATGACCCTGGTGCAGGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCGGGC > 4:251477/1‑301 cGGACGGCCTGCGCGCCCTGCCGTCCTTGCTGGCCGGCCTGCCCAGCGGCCCGGCTTCCGCCCTGCGCCTGCCGGCCGGTGAGGTGAAAGTGGGTGGCCCGGCCGCCCTGGTGCTGTTCTACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGACCTGCCCGTTCATCAGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTGAGCGGGCATGCCCGCGAATGCCTTCACATAGTCCCCCCG < 4:807060/300‑1 ccgacgcgcgtccgaccgcctggcgGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCGGTTGAGCTGAACGATGGTGGCCCGGCGGACCTGGTGCTGTTTGACCCGCACGCGGCCACCGTTGCTGGCGAAGAATGGTCCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCAGTGCCTGCCGGGGGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCGGGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGC < 1:218960/276‑1 CCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCGGGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCATCCCCCC < 3:352721/301‑1 ttgagacgtgtgctctcccgatctCGCAAGCGTCCACCGTGGCTGGCGAACTATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATCGCCACATTTGCCACGAAGCCTGAGTACCATGCTTAGCGGGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCATCCCCCCCGGTTGAAATCCTTCCCCCCACCCCCATATGAGTCTGCATCAGGCACTTTCGCCCCGCTGCGTGGAGACTCTCCC < 3:228223/277‑1 ctgtgctctcatcgacaaCGTCCACCGTTGCGGGCGACCTAGTGCTCTCCCGTGGCGACAACTGCCCCGTCATCGGCGACTACCTGCCGTACGCGGTGCGTTATATCTTGGTCGATCGCCACATCTCCCACGAGGCCTGAGACCCATGCTTAGCGGGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCATCCCCCCCGGTTGAAATCCTTCCCCCCACCCCCATATGAGTCTGCATCAGGCACTTTCGCCCCGCTGCGTGGAGACTCTCCCCTTGACCACAAT < 3:59224/283‑1 CCGCACGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGGAGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCGGGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCATCCCCCCCGGTTGAAATCCTTCCCCCCACCCCCATATGAGTCTGCATCAGGCACTTTCGCCCCGCTGCGTGGAGACTCTCCCCTTGACCACAATCGTTTCTGTCC < 4:60269/301‑1 gtgtgctcttccgatctactttggcTCTCCCGGAGCGAGACCTGCCCGTTCATCGGCCACTGCCTGCCGTGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCGGGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCATCCCCCCCGGTTGAAATCCTTCCCCCCACCCCCATATGAGTCTGCATCAGGCACTTTCGCCCCGCTGCGTGGAGACTCTCCCCTTGACCACAATCGTTTCTGTCCGCCGTAACG < 3:551868/276‑1 cCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGACCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCGGGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCATCCCCCCCGGTTGAAATCCTTCCCCCCACCCCCATATGAGTCTGCATCAGGCACTTTCGCCCCGCTGCGTGGAGACTCTCCCCTTGACCACAATCGTTTCTGTCCGCCGTAACGGCAAAGTCGTCATGGGCGGCGACGGCC < 3:490983/300‑1 ccttacTCGATCGCCACAACTGCCACGAATCCTGAGTACCATGCTTAGCGGGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCATCCCCCCCGGTTGAAATCCTTCCCCCCACCCCCATATGAGTCTGCATCAGGCACTTTCGCCCCGCTGCGTGGAGACTCTCCCCTTGACCACAATCGTTTCTGTCCGCCGTAACGGCAAAGTCGTCATGGGCGGCGACGGCCAGGTATCCCTCGGCAACACCGTGATGAAAGGCAACGCCAAGAAGGTGCGCCGCCTGTA < 3:274624/295‑1 ccgccgcacttccgatctGGCCTGCGAACCATGCGTAGCGGGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCATCCCCCCCGGTTGAAATCCTTCCCCCCACCCCCATATGAGTCTGCATCAGGCACTTTCGCCCCGCTGCGTGGAGACTCTCCCCTTGACCACAATCGTTTCTGTCCGCCGTAACGGCAAAGTCGTCATGGGCGGCGACGGCCAGGTATCCCTCGGCAACACCGTGATGAAAGGCAACGCCAAGAAGGCGCGCCGCCTGTACCACGGCCAG < 1:498057/283‑1 tgcttccgacctatcgTAGCGGGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCATCCCCCCCGATTGAAATCCTTCCCCCCACCCCCATATGAGTCTGCATCAGGCACTTTCGCCCCGCTGCGTGGAGACTCTCCCCTTGACCACAATCGTTTCTGTCCGCCGTAACGGCAAAGTCGTCATGGGCGGCGACGGCCAGGTATCCCTCGGCAACACCGTGATGAAAGGCAACGCCAAGAAGGTGCGCCGCCTGTACCACGGCCAGGTCATCGCGGGCTTCGCCG < 1:467711/285‑1 cccaggcgTAGCTGGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCATCCCCCCCGGTTGAAATCCTTCCCCCCACCCCCATATGAGTCTGCATCAGGCACTTTCGCCCCGCTGCGTGGAGACTCTCCCCTTGACCACAATCGTTTCTGTCCGCCGTAACGGCAAAGTCGTCATGGGCGGCGACGGCCAGGTATCCCTCGGCAACACCGTGATGAAAGGCAACGCCAAGAAGGTGCGCCGCCTGTACCACGGCCAGGTCATCGCGGGCTTCGCCGGCGCCACT < 3:632327/293‑1 GGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCATCCCCCCCGGTTGAAATCCTTCCCCCCACCCCCATATGAGTCTGCATCAGGCACTTTCGCCCCGCTGCGTGGAGACTCTCCCCTTGACCACAATCGTTTCTGTCCGCCGTAACGGCAAAGTCGTCATGGGCGGCGACGGCCAGGTATCCCTCGGCAACACCGTGATGAAAGGCAACGCCAAGAAGGTGCGCCGCCTGTACCACGGCCAGGTCATCGCGGGCTTCGCCGGCGCCACTGCCGACGCCTTCA < 3:6746/301‑1 GGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCATCCCCCCCGGTTGAAATCCTTCCCCCCACCCCCATATGAGTCTGCATCAGGCACTTTCGCCCCGCTGCGTGGAGACTCTCCCCTTGACCACAATCGTTTCTGTCCGCCGTAACGGCAAAGTCGTCATGGGCGGCGACGGCCAGGTATCCCTCGGCAACACCGTGATGAAAGGCAACGCCAAGAAGGTGCGCCGCCTGTACCACGGCCAGGTCATCGCGGGCTTCGCCGGCGCCACTGCCGACGCCTTCA < 4:368110/301‑1 GTCGAGTTGCTGCTGCCACTGGCCATGACCCTGGTGCAGGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/5696261‑5696567‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgggcaTGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCATCCCCCCCGGTTGAAATCCTTCCCCCCACCCCCATATGAGTCTGCATCAGGCACTTTCGCCCCGCTGCGTGGAGACTCTCCCCTTGACCACAATCGTTTCTGTCCGCCGTAACGGCAAAGTCGTCATGGGCGGCGACGGCCAGGTATCCCTCGGCAACACCGTGATGAAAGGCAACGCCAAGAAGGTGCGCCGCCTGTACCACGGCCAGGTCATCGCGGGCTTCGCCGGCGCCACTGCCGACGCCTTCA > AE015451/5696629‑5696925 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |