New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 2282748 | 25 (0.290) | 13 (0.150) | 13/540 | 7.7 | 34.9% | intergenic (‑140/+89) | PP_2010/PP_2011 | Cytochrome b561/conserved exported protein of unknown function |
? | AE015451 | 2282815 = | 24 (0.280) | intergenic (‑207/+22) | PP_2010/PP_2011 | Cytochrome b561/conserved exported protein of unknown function | |||||
Rejected: Coverage evenness skew score above cutoff. |
AGGGCGATGGACAGGCGCGCGTAATGGGTGGTGGGGGGGGATGAAACCATGATTGGTCCTCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCACCCAGTCCCGCCGACGAAGCCAGCGCCCCCGC > AE015451/2282559‑2283107 | aGGGCGATGGACAGGCGCGCGTAATGGGTGGTGGGGGGGGATGAAACCATGATTGGTCCTCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCCGGCGACATCAGTTACCGGGCAGATAGGGcc > 1:211808/1‑301 (MQ=255) cgTAATGGGTGGTGGGGGGGGATGAAACCATGATTGGTCCTCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTAc < 1:26484/267‑1 (MQ=255) cATGATTGGTCCTCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCCACCACCAGAAACACCCGTTCTGCCTCCTGCCCGGCAcc > 1:426523/1‑300 (MQ=255) gcTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTAc < 1:230209/279‑1 (MQ=255) ggAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCa > 2:443519/1‑174 (MQ=255) ggAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCa < 1:443539/174‑1 (MQ=255) ggAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACACACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGAACAAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGcc > 1:411113/1‑294 (MQ=255) cAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGcc > 1:184570/1‑300 (MQ=255) tgtgAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGCCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCCCCGCCTGCCAGCACTc > 2:550045/1‑301 (MQ=255) aaaaaTGTGTTGCCAGCCCCCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGGCTTGGGAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCt < 2:838553/301‑1 (MQ=255) aTGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACCTCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGAc > 1:433511/1‑300 (MQ=255) ccGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGGGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCa < 2:184566/301‑1 (MQ=255) cgctaccacagaaaaaatGCACAGTCTTGGAAGCCTGTGAAGTAGGACGGTGGGAGCGGGCGTGATCGAGACGGGGCCGGAGCAGGCGACATCAGTTACCGGGGAGATAGGGCCAGTCATCCGCCAAAAGGAACACCCGTTCTGCCACCTGCCAGGCACCCTCGGCATCCGGCACCAGGCGTACAAGCAAGAgcgc > 2:513903/18‑196 (MQ=255) cccACAGTCCAACTGCACAGCCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGc < 1:550066/298‑1 (MQ=255) caGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCgccagcca > 1:367248/1‑278 (MQ=255) caGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCgccagcca < 2:367236/278‑1 (MQ=255) tGCACAGTCTTGAAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCAGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGACAGCCCACCCCTGACTCCACCCTTGCCGGCGCCAGCCAGGAATGCCGCTCCAGCGGTTGcc > 2:119792/1‑292 (MQ=255) ttGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGcc > 1:222069/1‑300 (MQ=255) aGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCAATCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCCAGCCCTCGGCCATCAc > 2:144537/1‑300 (MQ=255) gccagccaccggcctcttcgctggcacgCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGc < 2:944435/255‑1 (MQ=255) gccagccaccggcctcttcgctggcacgCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGc > 1:944461/28‑282 (MQ=255) gTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCACCCAGTCccg < 2:222064/299‑1 (MQ=255) accggcctcttcgctggcacgCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGc > 1:467953/21‑256 (MQ=255) gtgGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGTCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCACCCAGt < 1:144540/287‑1 (MQ=255) tcttcgctggcacgCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTg > 1:724902/14‑248 (MQ=255) tcttcgctggcacgCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTg < 2:724876/235‑1 (MQ=255) gggAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCACCCAGTCCCGCcgac > 1:494602/1‑294 (MQ=255) tggcacgCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCACCCAGTCCCGCCGACGAAGCCAGCGccc > 1:679649/7‑301 (MQ=255) gggCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCa < 2:426503/233‑1 (MQ=255) gTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCACCCAGTCCCGCcgac < 2:494581/284‑1 (MQ=255) cgcgAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCACCCAGTCCCGCCGACGAAGCCAGCGCCCCCGc > 2:213020/1‑296 (MQ=255) | AGGGCGATGGACAGGCGCGCGTAATGGGTGGTGGGGGGGGATGAAACCATGATTGGTCCTCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCACCCAGTCCCGCCGACGAAGCCAGCGCCCCCGC > AE015451/2282559‑2283107 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |